Lytechinus variegatus (green sea urchin): 121429452
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Entry
121429452 CDS
T11173
Name
(RefSeq) DNA polymerase alpha catalytic subunit-like isoform X1
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121429452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lvg03032
]
121429452
Enzymes [BR:
lvg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
121429452
DNA replication proteins [BR:
lvg03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
121429452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_2
DUF1744
Motif
Other DBs
NCBI-GeneID:
121429452
NCBI-ProteinID:
XP_041482400
LinkDB
All DBs
Position
16:17295429..17364676
Genome browser
AA seq
1481 aa
AA seq
DB search
MAPVMDDRENDQDAGLSRRSRREVGKKKAGRMSALEKLKNAKKSGKRFYEEEEDMSNIYD
VVDEDEYSKIVRDRQDDDWIVDDDGGGYVEDGREIFDEDLRGDPEMEGDGSGKKNSRSGP
KKDKESKKPSKPKGDIRSLFLNAAKQKKKSEKDASVAGDELLGDILNEMHSESSAPILKP
LAIKKKIKVPGSSPANRNPFSSKTPTRPGPKSMTPRTITSERSAPIMAPRQRVTTSKQVK
REAVNEGGDSQLSKRARGVVIKTEPVEEFDDLDGMVDVDDTDFDVDDDMNVKKENIKVEE
VKEEEMEEEEEEEEKPQIKTEINPEVCSTTGWETIKGEVEEEGFVKMDVKVDSSSLPLTT
NDEGEKVLRMYWLDAYEDPYKQPGTVFLFGKVYIEDAKTHVSCCVSVKNIERKVFLLPRE
KKRNLKKGVDTDKDVTMMDVYQEFDAMTTKYKIMKFRSKKVTKQYCFEKSEVPAESEYLE
IRYGADIPQLPTDLHGETFSHIFGANTSCLELLLLDRKLKGPSWIDIKFPQLPTQPISWC
KVETFITKPDFITVVKDLTPPPLVVMTINLRTVLNQKTHRNEIVAVTALVHHRFPLDKAP
PKPPFQQHFCALSKPVDCIFPYDFKDAIRKKNMKVEILPSERALLGLFLAKVHTVDPDVI
VGHDIYGFDLDVLLHRISATKTPHWSKLGRLKRGTMPKLSGGTGRGSTFTEKNATCGRMV
CDVKISAKELMRFKSYDLTELSSQIIHEKRVEIPYERIKDMYTTSRELTYLVEMTWKDAF
FILRLMCELNVLPLALQLTTICGNVMSRTLMGGRSERNEHLLLHAFNEKNFLCPDKEYKK
RTQAVSMEGDEDQERPTRSKNKPSYAGGLVLDPKVGFYDKFILLLDFNSLYPSIIQEYNI
CFTTVAQTPSQEDGSNDDWMPEVPDSDLTDGILPTEIRKLVERRRQVKGLMKQPDLHPDI
RLQYDIRQKALKLTANSMYGCLGFSHSRFYAKPLAALVTSKGREILMHTKELVQKMNLDV
IYGDTDSIMINTNSTDHDTVFKLGNRVKTEVNKLYRLLEIDIDGVFQSMLLLKKKKYAAL
TVERLPDGTLKTSKEMKGLDIVRRDWCDLAKKVGSYAIDQILSADSREVIVDNIHSHLIE
LGEKVAAGTIPLDQYEIHKSLTKAPQDYPDKKSLPHVNVALRINSQGGGKPLGAGDTVSY
IVCVDGSNLPAGQRAYHPDELKKQEHLKVDTKYYLAQQVHPVVSRLCNPIEGTDAAHIAE
CLGLDASGYRHSVRHYEDENDALLGAQEDDEERFKDADRFKFICPNEACKRENIVDCVFT
GTQGSLAEARLSYCDSRCGTVPADHMTMLGNKLRLLIRTYIQKYYAGWLLCEDTSCAHRT
RRVPLNPHRQGFACPVCQRAVLKPEYSDKELYTQLCFFQNIFDYEKALTENTDKAKSRSQ
EQASVRSAYQTLKQVIDQRLAANAYSEVDLSKLFHGLFLMK
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atggcaccagtgatggatgacagagaaaatgatcaagatgctggtttatcaagacgttcc
agacgtgaggtcggcaaaaagaaggcagggcgcatgtctgctctggaaaaacttaaaaat
gccaagaaaagtgggaaaagattttatgaagaggaagaagatatgagcaatatttacgat
gtcgttgatgaagacgaatactccaagattgttcgagataggcaagatgacgattggatc
gtggatgatgatggaggaggatatgtagaagatgggagagaaatatttgatgaagatctt
cgtggtgatcctgagatggagggagatggttcaggtaaaaagaatagtagatctggtcca
aaaaaggataaagagtccaagaagccgagcaagccgaaaggtgacattagaagtctcttc
ttgaacgcggccaagcagaagaagaaatctgagaaggatgctagcgttgctggagatgaa
ctcttaggtgacatcctgaatgagatgcacagtgagtcctcagctcccattctaaaacca
cttgctatcaagaaaaagatcaaggttccaggatcttctccagccaataggaatcccttc
agcagcaagacccccacccgtccaggtccaaagtccatgacccctcgtaccatcacatcc
gagaggtcggcacccatcatggccccgaggcaacgcgtcacaacctccaaacaagtgaag
agagaagcagtaaacgaagggggcgattcgcagcttagcaagagggcgaggggcgtggtc
ataaaaacagagccggtagaggagtttgatgatcttgacggtatggttgatgtggatgat
acagactttgatgtcgatgatgacatgaacgtgaagaaggagaatatcaaggtggaggaa
gtgaaagaagaggagatggaggaggaggaagaggaagaagagaaacctcaaatcaagaca
gaaatcaatcccgaggtgtgttccaccactggatgggagaccattaaaggagaggtggag
gaggaaggattcgtcaagatggacgtcaaagtagattcttcctcgttgcccctgacgacc
aatgacgaaggagagaaggtattgaggatgtactggcttgatgcttacgaggatccctac
aaacaaccaggaacggtgtttctctttggtaaagtctacattgaggatgcaaagacccat
gtcagttgttgtgtttctgttaaaaacatagaaaggaaggtctttctgttaccaagggaa
aagaagaggaacctgaagaagggcgtcgatacagacaaggatgtcaccatgatggacgtc
tatcaagagtttgacgccatgacaaccaaatacaagatcatgaaattcaggtcaaagaaa
gtcaccaagcagtactgctttgagaagtccgaagttccggcagaatcagaatacttggag
ataagatacggggctgatatccctcaactacccactgatttacatggagaaaccttcagt
catatctttggagcaaacacatcctgtctggagctacttcttttggatcggaagctcaag
ggacccagttggattgacatcaagttccctcagctaccaacacagcccatcagctggtgt
aaagttgagactttcatcaccaaaccagacttcatcacagttgtcaaggatctaacccca
ccccctctggtcgttatgacgatcaacctccgcacagtgctcaatcagaagacacatcgc
aatgagattgttgccgtgacagccctcgttcaccataggttcccgttagataaggcacca
cccaaaccacctttccagcagcacttctgtgccttgagcaagcctgtcgattgcatcttc
ccttatgacttcaaagatgctataagaaaaaagaacatgaaggttgagatcttaccgtcg
gagagagcccttttgggactgttcttggccaaggtccacacggttgatcctgatgtcata
gtgggtcatgacatctatgggtttgaccttgacgttctccttcatcgaatcagtgccacc
aagactccacactggtctaaactaggaagactaaagcgtggaactatgcccaaacttagt
ggtggtacagggcgaggtagcacattcacagagaagaatgcgacatgcggtcgcatggtg
tgtgacgtgaagatctcggcgaaagaactgatgaggtttaagagctacgatctcaccgag
ctctcaagtcagattattcacgagaagagggtggagatcccgtatgaacgcatcaaggat
atgtacacgacctctcgtgagctgacataccttgttgagatgacgtggaaggatgctttc
tttattctccgtctcatgtgtgaactgaacgtactacctctagcgctacagctcactact
atctgtggaaatgtcatgtctcgtactctgatgggagggcgctctgaacgtaatgaacat
cttctgcttcatgcgttcaacgagaagaatttcctctgccccgacaaggaatataagaag
agaacacaggctgtcagtatggaaggagatgaggaccaggaacgaccaacaagatctaag
aacaaaccgtcctatgccggaggtctggtccttgatcctaaagttggtttctatgataag
ttcattctgctactggattttaacagtctctacccgtcgatcattcaggagtataacatc
tgctttacgacggtcgctcagacaccctcgcaggaggatggatctaatgatgactggatg
cctgaggtgccagacagcgacttgaccgatggcatcttaccgaccgagatccgcaagctg
gttgaacgacgtcgtcaggtcaaaggtcttatgaagcagcctgaccttcatccggatatc
agattacagtatgatatccgtcagaaagctctaaagctgacagctaacagtatgtatgga
tgtctgggtttcagtcactcaagattctatgctaaacccctcgctgcattggtcactagt
aaaggaagagagatcttgatgcataccaaagaactagttcaaaagatgaatcttgatgta
atctatggagacactgattctatcatgatcaacactaactcaacagaccatgatactgtc
ttcaaactcggcaatagggtcaagacggaggtcaacaaactttaccgtttgctggagatt
gacatcgatggtgtcttccagtcgatgctgcttctcaagaagaaaaagtatgctgccctc
acagtcgaacgtttgcccgacggcactctgaaaacttccaaggagatgaagggtttagat
atagtgaggagagactggtgtgacttggctaagaaagttggaagttatgcgattgatcag
atcttgtctgctgactcgagggaggtgatcgttgacaacattcactctcatctgattgag
cttggggagaaggttgctgcagggaccattccactagaccagtatgagatccacaagagt
ttaacaaaagcaccccaggactacccagataagaagagtcttcctcacgtcaatgtagcg
cttcggatcaacagtcaaggtggaggaaagccgctaggagctggtgacacagtctcctat
atagtctgcgtggatggatccaatctcccagctggtcagagagcctatcatccagatgag
cttaagaagcaagaacacctcaaggtcgataccaagtactatctagcccagcaggtccat
cctgtcgtatcccgtctttgtaaccccattgagggcacagatgctgctcatatcgcagag
tgtcttgggcttgatgcgtctggatatcgccactctgtccgtcattacgaagacgagaat
gatgcacttctaggagcccaagaagacgacgaggagaggttcaaagatgccgaccgattc
aaattcatctgccctaacgaagcttgcaagagggagaacatcgttgactgtgtattcact
ggcacgcagggttcgctggctgaggctcgtctgagttactgtgatagtcgctgtggaacg
gtaccagctgatcacatgaccatgcttgggaacaagctccgccttctcatccgcacctac
atacagaaatactatgctggttggttgctatgtgaggatacctcatgtgcacatcggaca
cgcagggtaccgcttaatccccatagacaggggtttgcctgtcctgtatgtcagagagct
gtcctaaaaccagagtactctgacaaggagctgtacactcagctttgtttcttccagaat
atcttcgactatgagaaggctctcacagaaaacactgataaagctaaatcaagaagtcaa
gagcaagcttctgtgaggtctgcatatcaaacactgaagcaggtcattgatcaacgactc
gctgctaacgcctactcagaagtggacctctccaagctattccatggtctctttctcatg
aagtaa
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integrated database retrieval system
