Lytechinus variegatus (green sea urchin): 121429586
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Entry
121429586 CDS
T11173
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein-like isoform X1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121429586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121429586
Membrane trafficking [BR:
lvg04131
]
Autophagy
Other autophagy associated proteins
Others
121429586
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
Motif
Other DBs
NCBI-GeneID:
121429586
NCBI-ProteinID:
XP_041482624
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Position
16:28482767..28528097
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AA seq
1091 aa
AA seq
DB search
MSTLRPDNDTTKDTRYHEHYGLLWKLKATVESLLAANASNVWSMYGGLNRLANQLDVILK
HGLKNDACPAQDYWNFVFGLRRIQPVLAPSIDQLSRRAEQEGRIKGLLWLQDSLENHTLS
FQLRMLVSETSHLREFYSDDAFLCSTAHSSALDILLQAVEQNNARLLAQVNPNLLQKCPS
SRGSVVSQGSPRLSRTPSMSLEQDITPKPKDHHHASDSLLFASPKTESVLATSEDQAFGQ
SRDIRRNSAKEALKALLDGYPTEGSGVVGVATGNRTEAFATDPLLNRPAIPITRESFQRP
HGLLRVESDTALLKTSVSRRKFDENDNRFSAKRKGSSGLAQNGNSDLSLSSERDRGMYWE
DAGDTEDLDDHSDTNDIHSKLVFTYDNSPSSSNFARTLDSSTEEIPSSKSATLLSSESGA
GNSLEPGYRTKDTKNGSSLNSSHHSLLHSSSEQLLFSEEEEDQFGFLGEVARRGRQSKPL
HRRNSEDLDGATPSPPPVQHKYRRHTRSMSDQISNVRGGGFEDSRRDFVPERKVYNGKRS
KDDIYSSSLPSEPLTARRVSDVSSASPACDGYFPQPSQGESLFTFLSSQDFATCPEVDKE
NAHFCISEAIIAAVEQIKCRQLTRQTPSDHESDGSDEEIQRLKQRIRLRRTEKRERKLQC
EQDQSPPDCDIWSPEHDGTDSPQFLSDSEESMEEAEDFVVTDTSLDTNLVAMKTKGLTAS
LGSLYSDADLKKANKMHPIETVIPLTKIEPSSSHQLSAESIALSLIKKFSFRQLPAASEL
EWLVSEKDAPQQLLPLPKSVPISPDDGENADLYKNMRLRGNLEWAPPRPQIVFSIHPPPK
RKQLIAKQNFRCAGCGMKAERGFLKRLRYCEYLGKYFCQCCHTNASSPIPSRILRKWDFS
RYPVSNFSQELLSKIQTDPVFNVVDVNPILYRKVKQMQAVKDLRTQLFFLKDFLKTCRLC
DRSLKASYDSQPGHWMGQPDLYSLSDLINVRSGEMEKALAQLVLDGVTHVSQCQLCQAKG
FVCELCNKDEIIFPFQLNSTFQCLECWACYHTVCFLKESKCPKCERILARRGVSAVKTET
SDEDTPSSSSS
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgttgcgccctgataatgataccaccaaggacaccagataccatgagcattat
ggattgttgtggaaattaaaagccactgtagaaagtctgcttgctgccaatgcctccaat
gtgtggtcgatgtatggtggcctcaatcgactggccaaccaacttgatgtgatattaaaa
catggccttaaaaatgatgcttgccctgcacaagactactggaattttgtctttggactg
cgccgtatccaaccagtgctggccccctctatagaccagctcagccgacgggcagagcag
gagggtcgcatcaaggggttgctatggttacaggatagtcttgagaatcatactctcagt
ttccagctcaggatgttagtttcagaaaccagtcacctcagggaattctactcagatgat
gccttcctgtgcagcacagcacattcatcggccttagacatcctgctacaagctgtagag
cagaacaatgcccgtctcctggctcaggtcaatcctaacttgcttcaaaagtgtccttcc
tctcgaggttctgtagtttcacaaggaagcccaaggctgtccagaactcccagtatgtca
ttagagcaggatatcacaccaaaacctaaggatcatcaccatgcttccgattctctcctt
tttgcctccccgaagactgaatcggtcctcgcgacatcggaagaccaggcctttggacag
agtcgcgacattcgcaggaattcagccaaagaggcattgaaagcattattagacggatac
cccactgaggggtccggcgttgttggtgttgcaacgggcaacagaactgaagcgtttgcg
acggatccgcttttgaatcgtccagcgattccgatcacgagggagagtttccaaagaccg
cacggtcttctgcgtgtggagagtgatactgccctcctgaagacgtcggtgtcgaggaga
aaatttgacgagaatgataatcggttctctgccaagcgaaagggttctagtgggttagcg
caaaatgggaacagcgatctttcactgagttctgagagagacagaggtatgtattgggaa
gatgcaggagatacagaagatttagatgatcacagtgacaccaacgacatccacagtaaa
ttagtgttcacatacgacaactcaccttcttcctcaaattttgccagaaccctggactcg
tccacggaggaaatcccatcttccaagagcgccactttgctttcatcggaatccggtgca
ggcaacagtctagagccaggatatcggactaaagataccaaaaatggaagctcgctaaat
tcaagccaccattctcttctgcattccagcagcgaacaactactcttttccgaggaggag
gaagaccagtttggtttcctgggtgaagtcgcacgaagagggcgccagtccaagcctctc
caccggcggaacagtgaggacctagatggggcgacaccgtccccacctccagttcagcac
aagtaccggagacacactcgctctatgtcggatcaaatctccaacgtgagaggaggaggg
tttgaagactctaggagagactttgttccagaaagaaaagtttataatggaaagaggtca
aaagatgatatctattcgtcttctcttccatcggaacctcttacggcaagacgagtatca
gatgttagtagtgcctctcccgcgtgcgatgggtatttcccccaaccgagtcagggagaa
tccctctttacattcctctcatcgcaagactttgctacctgtcctgaagttgataaggag
aatgcccacttctgtatctccgaggccatcatcgctgccgtggagcagatcaaatgccgt
cagctaacccgacagactccgtcggaccacgaatctgacgggtccgacgaggagatccag
agactgaagcagaggatccgcctcaggcgtaccgagaagcgcgaacgtaaactacagtgt
gaacaggaccaaagccctcctgattgtgatatttggagcccagagcacgatggcacggat
tcaccccaatttctgtccgattcagaggaatccatggaagaagccgaggactttgtagtg
acggatacttctttggacaccaatctggttgctatgaagacgaaaggtctgactgcatca
cttggctcgctttattcagatgccgatctgaagaaagcgaacaagatgcaccccatcgag
acggtcataccacttactaagatagagccttcctcgtcccaccaactctctgcggaatcc
atagcactttccctcatcaagaagttctctttccgacagctcccggctgcatcggaatta
gaatggttggtgtctgaaaaagatgcccctcaacagctcttgcctttacccaagtcagtt
cccatatctcctgatgatggtgaaaatgctgacctctataaaaatatgcgtctccgtgga
aaccttgagtgggcccctcctcgacctcaaatagtgttcagtattcaccctcctccaaaa
cggaaacagctcattgccaagcagaatttccgctgtgccggttgcggaatgaaggcagaa
aggggtttcctgaagcgcttgcggtactgcgagtacctgggaaagtacttctgccagtgc
tgccacaccaacgcatcctcccccatccctagtcgaatcctcaggaagtgggatttcagt
cgttacccggtgtccaacttctcgcaagagctcctgtccaagatccagactgatccggtc
ttcaatgtggtagacgtcaacccgattctctacaggaaagtcaagcaaatgcaggctgtc
aaggatttgcgaacacaattattcttcctgaaagatttcctgaagacgtgtagactgtgc
gacagaagtttgaaagcatcatacgacagtcagcccggccactggatgggccagcctgac
ctctactcgttaagtgaccttatcaacgtacgcagcggggagatggagaaagccctcgct
caactggtcctcgatggtgttactcatgttagccagtgtcagctgtgtcaagccaagggc
tttgtttgtgaattgtgcaataaagatgagattatctttccattccaactcaactctact
ttccagtgtttagaatgctgggcctgttatcatacggtatgtttcctgaaagaaagcaag
tgccccaagtgtgaacgcatcctagctagacgtggtgtaagtgcagtgaagacggaaaca
agcgatgaagatacgccgagttcatcctccagctaa
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