Lytechinus variegatus (green sea urchin): 121429602
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Entry
121429602 CDS
T11173
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit DKC1-like
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121429602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lvg03009
]
121429602
03032 DNA replication proteins [BR:
lvg03032
]
121429602
Ribosome biogenesis [BR:
lvg03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
121429602
Prokaryotic type
121429602
DNA replication proteins [BR:
lvg03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
121429602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
PUA
TruB_N
UPF0113
PUA_elF2D
Motif
Other DBs
NCBI-GeneID:
121429602
NCBI-ProteinID:
XP_041482648
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All DBs
Position
16:25867350..25881856
Genome browser
AA seq
569 aa
AA seq
DB search
MDGSAGSSKKSKKSKESKSLGDIQHEADFLIKPESAVAKLETAHWPLLLKNYDKLNIRTG
HYTPLPNGCSPLKREIKDYISSGFINLDKPANPSSHEVVSWIKKILRVEKTGHSGTLDPK
VTGCLIVCIERATRLVKSQQSAGKEYVCIVRLHEAIENQSKLAKAIETLTGALFQRPPLI
SAVKRQLRVRTIYESKLIEYDPQRHLGIFWVSCEAGTYIRTLCVHLGLLLGVGGQMAELR
RVRSGIQSEKEGLVTMHDVMDAQWVHDNHKDEGYLRRVIKPMEALLTGHKRIVLKDSSVN
SVCYGAKVMLPGVLRFEDGIEINSEVVLMTTKGEAIALGIALMTTATMATVDHGLVVKLK
RVIMERDVYPRKWGLGPKASMKKMMIKQGKLDKHGKPNADTPKDWVKGYEDYSVKKEPVE
EEKPVVETPVKKRRRESSTSSTEAPPVTPSGDASAVKEKKKKKKDKKVKEEVVEEEEEET
METSVAETPKSEKKKKKKKMKSEPEAEEEEEMVEETAAETPKSEKKKKKKKIKLEQAEEE
ESQETVVETPSSEKKKKKKKKKEKTEDDS
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggatgggagcgcaggatcaagcaagaagagtaaaaagagcaaggagtccaaatcactt
ggggatattcagcatgaagcagatttcctgatcaaaccggaatcggcagtagccaaactc
gagacggcccactggcccttgcttctaaagaactatgataaattaaacatcagaacgggg
cattatacgccattacccaatggttgctcacctctcaaacgggaaatcaaggattatatc
tcgagtgggtttatcaaccttgacaagcctgccaatccttcatctcatgaggtcgtgtcg
tggatcaagaagattctcagggtcgagaagacgggtcacagtgggacccttgaccccaag
gtcaccggctgcctcatcgtctgtatagaacgagccacacgattggtcaaatcacagcag
agtgcaggcaaggaatatgtctgcatagtcaggttacatgaagctattgaaaaccagtca
aaactagccaaggctattgaaacgttgacaggagcactgttccagagaccgcctttaata
tcagccgtcaaacgacaacttagagtgaggacaatatacgaaagcaaactcatcgaatac
gacccacaaagacatttaggtattttctgggtgagctgtgaagcaggaacctatatcagg
acactatgcgttcaccttggactcctgttaggggtcggaggtcaaatggcagaactcagg
agagtgcgatccggtattcagtcagaaaaggaagggttggtgacgatgcacgatgtcatg
gatgcccagtgggtccatgacaaccataaagatgaaggttacctcaggagagtcatcaag
ccgatggaagccttgcttacaggtcacaagagaatagtactcaaagacagctcggtgaat
tctgtctgctacggagccaaggtcatgcttcccggcgtcctccgcttcgaggacggcatc
gagatcaactcagaggttgtgctgatgaccaccaagggagaggccatcgctcttggcatc
gcattgatgaccacagcgaccatggcaacggttgaccatggccttgtggtcaagctaaag
agggtcatcatggagagggacgtgtaccccagaaagtggggcctcgggccaaaggcgagc
atgaagaagatgatgatcaagcaagggaagctggacaagcatggcaaaccaaacgcagac
actcccaaggattgggtcaaaggctatgaagactacagtgtgaagaaagagccggttgag
gaagagaagcctgtagtggagacgcccgtcaagaagcgaaggagagaatcaagtacctcg
agcaccgaggctcctccagtcacgcccagtggggatgcatctgctgtcaaagagaagaag
aagaaaaagaaggataaaaaagtgaaggaagaagtagtggaagaggaagaagaggagacg
atggaaacatcagtggcagagacgcctaagtcagagaaaaagaagaagaaaaagaaaatg
aagtctgaaccagaggcagaggaggaagaggagatggtggaagaaacagcagctgagact
cctaagtcagagaagaagaaaaagaaaaagaagatcaaactcgaacaggcagaagaggag
gaatcacaggaaacagtagttgagaccccatcatcagaaaagaagaagaaaaagaagaaa
aagaaggagaagacagaggatgatagctga
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