Lytechinus variegatus (green sea urchin): 121429612
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Entry
121429612 CDS
T11173
Name
(RefSeq) integrator complex subunit 6-like isoform X1
KO
K13143
integrator complex subunit 6
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lvg03041
]
121429612
Spliceosome [BR:
lvg03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
121429612
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_INTS6
INT_SG_DDX_CT_C
VWA_2
SKA2
VWA
Tmemb_cc2
VWA_4
New_glue
Motif
Other DBs
NCBI-GeneID:
121429612
NCBI-ProteinID:
XP_041482664
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Position
16:complement(28357846..28381385)
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AA seq
967 aa
AA seq
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MPVLVFLIDTSASMNQRTHLGTSLLDIAKGAVETFMKLRLRDQASRTDRYMLVTCDESPA
TIKAGWKENPAVFMTELKNLQATGLTTLGHALKMTFDLLNVNRLYSGIDNYGQGRNPFYL
EPAIVIAITDGHRLSSNSGVQDELSLPMSHVLPGSELTREPFRWDQRLFALVLRLPGVAG
EKERMGPTSSLVNTDDSPISSMCEVTGGRSYMVNSMKTLNQCLESLVQKVQSGVVVHFEK
FGPDPGLPNGEMKAGGRQSPQPPEVEREGTPQPLDAPGTLGVPPNGRNGAPSPTPQDTSW
YSCRRMIHVRPNPKSGVPMGHWPIPETFWPDPQAPALPQRVSHPVVKFTCTNCDPMILDQ
LPFDKYELEPSPLTQYILERRNPNSCWQVFVPNSNKNGDIMGHPFGFLKASSNLSCVNLI
VMPYNYPTLIPLLDDLCKIHKLKPSQKWKQAFDSYLEEVPRYYAGPLKVALRRMGAPNLI
PDGLENCLSYSVVTYLKKLKQRSKVEGEKLANLIASRPRAQELGIKVQSRSPLRSLAARR
DFQQLLQSITGETITVRADNNVNEFPGYMLRVSDRDIRPQTYRNPFDIPRKEILDQVFRM
RANFLQITSNRAVRFMNEDKFHNIPIGEMGNYQEYLKRIPSPLREADPAPARLHTFGNPF
KLATEKDKKMMVDEADINEHMAGIPQKRRASDSNLSLKKLKGASPPSRRPTSPAAQGALL
KQPLHQLVQRRAQNANATNGSNKENKNSGSSTPERLPTPELKPQEPPASGDESGSSSDEL
VIIMDGINDEVAMETSSNASSEDEATPTSPSPSSLSSSTLPVSSGSSTTTSNHVDSKKSN
SKHRKMNNNNVLPPSEPSTTNNARNTAYERMDSMNSDIDVNVVNSRLRTKVIREVRKPGK
NFRRLFEELNKIQGDMDTKYLFIESIINEAKRFRRKTLIGMLEMFRSSMVTFEKKQSLGS
TGSNHVR
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgttagtttttctaatagacaccagtgcttcgatgaatcagaggacacatttg
ggcacatcactcttggatattgcgaagggagctgtcgagacattcatgaagcttcgcctt
cgagaccaagccagccgcacggatcgctacatgctggtgacgtgcgacgagtctccggct
acaataaaggctggctggaaggagaatcctgcagtcttcatgactgagctgaagaacctt
caggccaccggtctcacaaccttgggtcatgccctcaagatgacctttgaccttttgaat
gtcaaccgtctctactctggaatcgacaactatggccagggtcggaacccattctacctg
gaaccagccattgtcatagcaatcactgatggacatagactttcaagtaacagcggtgtt
caggatgagctatcgcttccgatgagccacgtccttcccgggagcgaactgaccagggag
cccttcagatgggaccagcggttattcgctctggtgctgcgcctgccgggggtcgcgggg
gagaaggaacggatggggccgaccagtagcctggtgaatacagatgactctcctataagc
agcatgtgcgaggtgacgggaggtcgctcttatatggtaaactctatgaaaaccctaaac
cagtgccttgagtcccttgtccagaaggtccagagcggtgtggtagtccattttgagaag
tttggaccagatcctggcctgcctaacggagagatgaaagctggaggacgccagtcccct
caaccaccagaggtggagcgggagggcacgccacagccgctggatgccccgggcactttg
ggggtgccccctaatgggcgtaatggggcgccgtcccctaccccccaggatacctcgtgg
tacagctgccgtaggatgatccatgtgagacctaacccaaagagtggtgtacccatggga
cactggccaatccccgagacgttctggcctgatccacaggcaccggcattgccccagcgt
gtatcacacccagtggtgaaattcacctgtacgaactgtgacccaatgattcttgatcaa
cttccgtttgataagtacgagctggaaccctcaccgctgacacagtacattttggaaagg
aggaaccctaactcatgctggcaggtattcgtacccaacagcaacaagaacggtgacatc
atgggtcacccgtttggcttcctgaaggcaagctccaacctatcgtgtgtgaaccttatt
gtaatgccgtacaactacccgaccctgatccctctcctagatgacctgtgtaagatacac
aagctgaagccctctcagaagtggaagcaggcattcgatagctatctagaggaagtcccc
agatactatgcagggccactgaaagtagctcttcggcggatgggtgcgcccaacctaata
cccgatggcctagagaactgcctgagttacagtgtggtgacgtaccttaagaaactcaag
caacggagcaaggtggaaggagagaagttagctaacctcattgccagccgaccccgagct
caggagctcggaatcaaagtacaatctaggtctccgttacgctctctggcagcacggcga
gacttccagcagctgctccagagcatcaccggcgagaccatcacagtccgggcagataac
aatgtcaacgagttccccgggtacatgctgcgggtgagcgaccgtgacattagaccccag
acctatcgcaacccctttgacattccccggaaggagatcttggatcaggtgttcaggatg
agggccaacttcctccagatcacgtcgaacagggcagtgagattcatgaatgaagataaa
ttccacaacattcccataggagagatggggaattaccaggagtacttgaagcggatacca
agccctctacgggaagcagaccccgccccggccaggcttcacacgtttggaaacccattc
aaattggcaacagagaaggataagaaaatgatggtcgatgaggcagacatcaacgagcac
atggcaggcatacctcagaagaggcgggcctcggacagcaatctttccctcaagaagttg
aagggagcgtcaccgcctagtcgtagaccaacgtcccctgctgcccagggggccctactc
aagcaacccttgcatcaactcgtccagcgaagggctcagaatgcaaacgcaaccaatggc
agtaataaggagaataagaattctggttcatcaactccggaaaggttgccaacaccggaa
ctcaaaccccaagaacctcctgcatcgggtgacgaatcgggaagctcttcggacgagctc
gtcatcatcatggatggcatcaacgatgaggttgccatggaaacaagcagcaatgcatcc
tcggaggacgaagccacgcccacatcgccgtctccgtcatcattatcatcatcaacactt
ccagtttcatcagggtcatcgacgaccaccagcaatcacgtcgactctaagaaatctaac
agcaaacaccgcaagatgaataataacaacgtgcttccaccatcagagccatcgacaacg
aacaatgcgaggaataccgcctatgagcggatggactcgatgaactcggatattgacgtg
aatgtggtcaattccagacttagaactaaagtaattagagaggtcagaaagccaggcaaa
aatttcagacgtctcttcgaggagctcaacaaaatccaaggcgacatggacaccaaatac
ctcttcatcgagagcatcatcaacgaggccaagcgattcagacgcaagaccctgatcggc
atgctggagatgttccgtagttccatggtgacgttcgagaagaaacaatcattaggaagc
acaggatccaatcacgtcagatag
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