Lytechinus variegatus (green sea urchin): 121429628
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Entry
121429628 CDS
T11173
Name
(RefSeq) sodium- and chloride-dependent betaine transporter-like
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
121429628
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lvg02000
]
121429628
Transporters [BR:
lvg02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
121429628
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
121429628
NCBI-ProteinID:
XP_041482699
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Position
16:6972352..6999403
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AA seq
603 aa
AA seq
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MSTDREKWSWKLDFLATNIGFVACFENMFRLPYLCYRNGGFIFFIPYLLAVTLITIPLMF
LEMVVGQYTSSGSIRAWKICPLFRGVGVASTVALFWRNIYYNVILAYSLYYLYSSCIGDE
LPWKSCGHEWNTPTCLDYDSEWVCINGTYLAVKKSDIPQLPTNQPTSEYVWDVRSVPSFD
DYDRCGVRPYKTVPSQEFWKHKVRGQPEVSRGMFDVGGVVWHLALCLFLAWTLVYFGLWK
GVKWMAKVFYFNVPFIYVVLFALLIRGVTLPGAFDGLLFFIFPNVHRLGVIDVWIAAGKE
AFYSFSIGLGAFTALGSFNKFHYNFYRDCMIVSYLKVITSMYCGVVVFSFIGFVAYTEGI
QVNSAVELGVNLMFSVFPHAFSHIASSRVWSFLFFLVLLNIGLNIQLVTVKAFVASLTDI
VPVWMRIRYYRELLVLGVCVINFLIGLALVTKGGWHVFVFFDFHGSGLLTLTWICLYESI
AIGWFYGFRRISSNIAEMLKWRQIEWYLVGWLVTCPILTLLLWIAAIFDLAELRFYQPPW
AIAIGVFIDISTMVWIHGAMLYAIIYQLIKGDGSIWTRLKLTVQPAITPLREEEEEPAQI
EMM
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacggatcgagaaaaatggagctggaaactagatttcttagcgacgaatatcgga
tttgtagcctgtttcgaaaatatgtttcgcttgccttacctctgctataggaacggtgga
tttattttcttcatcccatacctactggctgtgacgttaattacgatccctcttatgttc
ttggagatggttgttggtcaatatacatcatctggatccatcagggcctggaagatttgc
ccactgttcagaggtgttggtgtagcttccactgtggcgttattttggcgtaacatctac
tataacgtcatcttggcctacagcttatactatctctacagctcttgcattggcgatgag
cttccatggaagagctgcggtcatgaatggaacacgcccacctgccttgattatgactcc
gaatgggtttgcatcaatggaacatacctcgccgtcaagaagagtgatataccacagctt
ccaaccaaccaaccaacatccgaatatgtgtgggatgtgagatcagtaccttcctttgat
gactacgaccgatgcggtgttaggccttacaaaacagtaccgtcgcaagaattttggaag
cacaaagtgcgcggtcaacctgaagtgtcaagaggaatgttcgacgttggaggagttgtt
tggcatctggccttatgtcttttcctcgcttggacactcgtatactttggcctgtggaag
ggcgtcaagtggatggccaaggtgttctatttcaacgttcccttcatatacgtcgtcctc
tttgcgttgctgatccgtggggtaacattacccggagcttttgatggattgctgtttttt
atctttccaaacgtgcacagactcggagttattgatgtatggatagctgctggaaaagag
gctttttattccttttcgattggacttggtgccttcacagcacttgggagttttaacaag
ttccactacaatttttatagggactgtatgatcgtatcttatttgaaggtgattacgagt
atgtactgtggtgtcgtggttttctccttcattggcttcgtagcgtacaccgagggaatc
caagtaaatagtgctgtagaattaggtgtcaacctgatgttctcggtctttcctcatgcc
ttttctcatattgcttcgtcacgagtctggtcatttttattctttcttgttcttctgaac
attggtctaaacatacagctcgtcacagtcaaagcattcgttgcctctctcactgatatt
gtccctgtctggatgcggatacggtattacagagaactgcttgttttaggggtctgcgta
attaatttcttgatcggcctcgctcttgtgacgaagggaggttggcatgtctttgtattc
ttcgactttcatgggtctggcctactgaccctcacttggatctgtctttacgagagcatt
gcaattggatggttctatggatttaggcgtatttcgtcaaacattgctgaaatgctgaaa
tggcggcagattgaatggtacctagtagggtggctagttacctgcccaatccttaccctg
cttctttggattgctgcaatatttgatctggcggagctccggttctaccaacccccttgg
gccattgctataggcgtcttcattgatatctcaactatggtttggatccacggtgccatg
ctctatgccattatctatcagttgatcaaaggtgatggatccatttggacgagactgaaa
ctgactgttcaaccagcgatcacccctcttcgcgaagaagaagaagaaccagctcaaata
gaaatgatgtaa
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