Lytechinus variegatus (green sea urchin): 121429663
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Entry
121429663 CDS
T11173
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein-like isoform X1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121429663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121429663
Membrane trafficking [BR:
lvg04131
]
Autophagy
Other autophagy associated proteins
Others
121429663
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
Motif
Other DBs
NCBI-GeneID:
121429663
NCBI-ProteinID:
XP_041482745
LinkDB
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Position
16:complement(27076502..27130255)
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AA seq
1093 aa
AA seq
DB search
MSTLRPDALNDTTKDTRYHEHYGLLWKLKATVESLLAANASNVWSMYGGLNRLANQLDVI
LKHGLKNDACPAQDYWNFVFGLRRIQPVLAPSIDQLSRRAEQEGRIKGLLWLQDSLENHT
LSFQLRMLVSETSHLREFYSDDAFLCSTAHSSALDILLQAVEQNNARLLAQVNPNLLQKC
PSSRGSVVSQGSPRLSRTPSMSLEQDITPKPKDHHHASDSLLFASPKTESVLGTSEDHAF
GQSRDDRRNSAKEALKALLEGYPSEGSGVVRVATGNRTEAFATDPLLNRPAIPITRESFQ
RPHGLLRVESDTALLKTSVSRRKFDENDNRFSAKRKGSSGLAQNGNSDLSLSPGRDRGMY
WEDAGDTEDLDDHSDTNDIHSKLVFTYDNSPSSSNFARTLDSSTEEIPSSKSATLLSSES
GAGNSLEPGYRTKDTKNGSSLNSSHHSLLHSSSEQLLFSEEEEDQFGFLGEVARRGRQSK
PLHRRNSEDLDGATPSPPPVQHKYRRHTRSMSDQISNMRGGGFEDSRRDFVPERKVYNGK
RSKDDIYSSSLPSEPLTARRVSDVSSASPACDGYFPQPSQGESLFTFLSSQDFATCPEVD
KENAHFCISEAIIAAVEQIKCRQLTRQTPSDHESDGSDEEIQRLKQRIRLRRTEKRERKL
QCEQDQSPPDCDIWSPEHDGTDSPQFLSDSEESMEEAEDFVVTDTSLDTNLVAMKTKGLT
ASLGSLYSDADLKKANKMHPIETVIPLTKIEPSSSHQLSAESIALSLIKKFSFRQLPAAS
ELEWLVSEKDAPQQLLPLPKSVPISPDDGENADLYKNMRLRGNLEWAPPRPQIVFSIHPP
PKRKQLIAKQNFRCAGCGMKAERGFLKRLRYCEYLGKYFCQCCHTNASSPIPSRILRKWD
FSRYPVSNFSQELLSKIQTDPVFNVVDVNPILYRKVKQMQAVKDLRTQLFFLKDFLKTCR
LCDRSLKASYDSQPGHWMGQPDLYSLSDLINVRSGEMEKALAQLVLDGVTHVSQCQLCQA
KGFVCELCNKDEIIFPFQLNSTFQCLECWACYHTVCFLKESKCPKCERILARRGVSAVKT
ETSDEDTPSSSSS
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgttgcgccctgatgctcttaatgataccaccaaggacaccagataccatgag
cattatggattgttgtggaagttaaaagccactgtagaaagtctgcttgctgccaatgcc
tccaatgtgtggtcgatgtatggtggcctcaatcgactggccaaccaacttgatgtgata
ttaaaacatggccttaaaaatgatgcttgccctgcacaagactactggaattttgtcttt
ggactgcgccgtatccaaccagtgctggccccctctatagaccagctcagccgacgggca
gagcaggagggtcgcatcaaggggttgctatggttacaggatagtcttgagaaccatact
ctcagtttccagctcaggatgttagtctcagaaaccagtcacctcagggaattctactca
gatgatgccttcctgtgcagcacagcacattcatcggccttagacatcctgctacaagct
gtagagcagaacaatgcccgtctcctggctcaggtcaatcctaacttgcttcaaaagtgt
ccttcctctcgaggttctgtagtttcacagggaagtccaaggctgtccagaactcccagt
atgtcattagagcaggatatcacaccaaagcctaaggatcatcaccatgcttccgactct
ctcctctttgcctccccgaagactgaatcggtcctcgggacatcggaagaccatgccttt
ggacagagtcgcgacgatcgcaggaattcggccaaagaggcattgaaagcattattagaa
ggatacccctctgaagggtccggtgttgtacgtgttgcaacgggcaacagaactgaagcg
tttgcaacggatccgcttttgaatcgtcctgcgattccgatcacgagggagagtttccaa
agaccgcatggtcttcttcgtgtggagagtgatactgccctcctgaagacgtctgtgtca
aggagaaaatttgacgagaatgataatcggttctctgccaagcgaaagggttctagtggg
ttagcgcagaatgggaacagtgatctttcgctgagtcccgggagagacagaggtatgtat
tgggaagatgcaggagatacagaagatttagatgatcacagtgacaccaacgacatccac
agtaaattagtgttcacatacgacaactcaccttcttcctcaaattttgccagaaccctg
gactcgtccacggaggaaatcccatcttccaagagcgccactttgctttcatcggaatcc
ggtgcaggcaacagtctagagccaggatatcggactaaagataccaaaaatggaagctcg
ctaaattcaagccaccattctcttctgcattccagcagcgaacaacttctcttttccgag
gaggaggaagaccagtttggtttcctgggtgaagtcgcacgaagagggcgccagtccaag
cctctccaccggcggaacagtgaggacctagatggggcgacaccgtccccacctccagtt
cagcacaagtaccggagacacactcgctctatgtcggatcaaatctccaacatgagagga
ggagggtttgaagactctaggagagactttgttccagaaagaaaagtttataatggaaag
aggtcaaaagatgatatctattcgtcttctcttccatcggaacctcttacggcaagacga
gtatcagatgttagtagcgcctctcccgcgtgcgacgggtatttcccccaaccgagtcag
ggagagtccctctttacattcctctcatcgcaagattttgctacctgtcctgaagttgat
aaggagaatgcccacttctgtatctccgaggccatcatcgctgccgtggagcagatcaaa
tgccgtcagctaacccgacagactccgtcggaccacgaatctgacgggtccgacgaggag
atccagagactgaagcagaggatccgcctcaggcgtaccgagaagcgcgaacgtaaacta
cagtgtgaacaggaccaaagccctcctgattgtgatatttggagcccagagcacgatggc
acggattcaccccaatttctgtccgattcagaggaatccatggaagaagcagaggacttt
gtagtgacggatacttctttggacaccaatctggttgctatgaagacgaaaggtctgact
gcatcacttggctcgctttattcagatgccgatctgaagaaagcgaacaagatgcacccc
atcgagacagtcataccacttactaagatagagccttcctcgtcccaccaactctctgcg
gaatccatagcactttccctcatcaagaagttctctttccgacagctcccggctgcatcg
gaattagaatggttggtgtctgaaaaagatgccccacaacagctcttgcctttacccaag
tcagttcccatatctcctgatgatggtgaaaatgctgacctctataaaaatatgcgtctc
cgtggaaaccttgagtgggcccctcctcgacctcaaatagtgttcagtattcaccctcct
ccaaaacggaaacagctcattgccaagcagaacttccgctgtgccggttgtggaatgaag
gcagaaaggggtttcctgaagcggttgcggtactgcgagtacctgggaaagtacttctgc
cagtgctgccataccaacgcatcctcccccatccctagtcgaatcctcaggaagtgggat
ttcagtcgttacccggtgtccaacttctcgcaagagctcctgtccaagatccagactgat
ccggtcttcaatgtggtagacgtcaacccgattctctacaggaaagtcaagcaaatgcag
gctgtcaaggatttgcgaacacaattattcttcctgaaagatttcctgaagacgtgtaga
ctgtgcgacagaagtttgaaagcatcgtacgacagtcagcccggccactggatgggccag
cctgacctctactcgttaagtgaccttatcaacgtacgcagcggggagatggagaaagcc
ctcgctcaactggtcctcgatggtgttactcatgttagccagtgtcagttgtgtcaagcc
aagggctttgtttgtgaattgtgcaataaagatgagatcatctttccattccaactcaac
tctactttccagtgtttagaatgctgggcctgttatcatacggtatgtttcctgaaagaa
agcaagtgccccaagtgtgaacgcatcctagcaagacgtggtgtgagcgcagtgaagacg
gaaaccagcgatgaagatacgccgagttcatcctccagctaa
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