Lytechinus variegatus (green sea urchin): 121429837
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Entry
121429837 CDS
T11173
Name
(RefSeq) FERM, ARHGEF and pleckstrin domain-containing protein 1-like isoform X1
KO
K06082
FERM, RhoGEF and pleckstrin domain protein 2
Organism
lvg Lytechinus variegatus (green sea urchin)
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FERM_C
FERM_M
FERM_N
FA
SOS1_NGEF_PH
PH_13
RHG20_PH
PH_11
PH_20
Motif
Other DBs
NCBI-GeneID:
121429837
NCBI-ProteinID:
XP_041483014
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Position
16:1743878..1840654
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AA seq
1109 aa
AA seq
DB search
MSDYEAAGSRGEPVPVSPMKREDSMALSQLSENHGRYNDTTLSREGLSDRETSYSYGGYS
PAATPTHSYSTARSDGMSLGRDGTTPRKKGKTMSLKVQMLDDSVLTVDVVQNATGVDVFL
ECCRCLNLYEMDYFGLEYYTKGDHLVWLEPEKPVLKQVAAPKKTLFHFSVKFYLSDPGQL
HEEFTKYLFALQVKKDLANGRLPCSENTAALMASYILQAEVGDYSPMEHDDGRYITAFRF
VPNQSRPMELKIQEYHKNHIGQTMADADFNLLDVARRLEMYGVRLHPAKDYENVQLYLAV
SHQGTLVFQNNTKINTFSWAKIRKLSFKRKRFLIKLHPEGFGYPRSTVEFQMETRNDCKQ
FWKSCVEHHAFFRLTQIKYPRSRRRLLSRGSTFRYSGRTQKQVVEQARVGGNSRSLVTLN
ASRMSTRSLGAPRTTTPLTIDMTETIVTDHHSAPNLAFPDDPTYAKPDMPKSPVSESPTS
PPSSTPITPVHENSRIAIHKGQSNSSIMYEYTVNDDNSQQQNQAEVDPSQASRLASSSGS
FNARMEPEPLVSSGETRLDALSDAEPKRNGDINMGGNQSSPAPSPTKSIPTYNNDTSEVV
SSPVSNHEEEPVKKKRHPPDRAYFIAKEILTTERTYLKDLEVVVVWFRKATTNEANLPET
LDILFSHLDPIYEFHCKFLKEVEQRLSSWEGRPNAQGKGGFQRVGDILLKNAQHLKLYTG
YIGKLEEILSDLEASLRKNKKFESFYRDFEIQKVCYLPFNTFLLKPVQRLLHYKLVLERL
VKHYQPSHPDYKDCKAAMGDVGDLTADIEDSVKRIENFQKLTELQRDLVGMDTLIQPNRH
FIREGCLHKLSRKGYQQRMFFLFSDVLVYTSKGVTPTNQFKVHGQIPLKGVVLEDSELDR
SVANCFTLYGGNKTVVIAASTPEEKLRWMEDIRLAMSMCQDDQPTDTLSSPDQDSAFEEA
EDDVSSPSKSIDRQSHHRANTTVHVCWHRNTSVSMADHVQAVENQLSGFLLRKFKNSNGW
QKLWVVFTNFCLFFYKSHQDDYPLASLPLLGYSVMIPAEEDDIRKDYVFKLQFKTHVYFF
RAESEYTFSRWMEVLKSATYSSKMENDVM
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgagcgactatgaggctgctggatctcgcggagaaccagtccctgtgtcgcccatgaag
cgggaggactccatggccctttcgcagctctctgaaaaccacggtcgttacaacgacacc
accctcagccgcgagggtctcagcgatcgagagacctcgtactcctacggcgggtacagt
cccgctgccacacctacccattcgtacagcactgcgagatcagacgggatgtctttgggt
cgggatggcaccacccctaggaagaaggggaagacaatgtcactcaaggttcagatgctg
gatgattctgtacttactgttgatgttgtgcaaaatgcaacaggtgtagatgtttttctt
gaatgttgtcggtgtctcaacctttatgagatggattactttggtttggaatattacaca
aagggagatcatttggtttggctagaacccgagaaacctgtcctcaaacaagttgcagct
cctaagaagacgttattccacttttcagtcaaattctacttatcggatccaggtcagctg
catgaagaattcacaaaatacttgtttgccttacaagtgaagaaagacctagccaatggt
agattaccgtgctcagaaaacacagcagccctcatggcttcatatatcttacaagccgag
gttggggactatagtccgatggaacatgacgatggtcgttacatcacagctttccgtttc
gtgcccaaccaatcaagaccaatggaacttaagattcaggagtaccacaagaaccacatc
ggtcaaacgatggctgatgcagacttcaatctcctggacgttgcgagaagactggagatg
tacggggtgcgtctccatccagccaaggactatgagaacgtccagctctatctggctgta
tcccatcaaggtaccttggtctttcagaacaacacaaagatcaacacattctcctgggcc
aagatccgcaagctcagcttcaagaggaagcgtttccttatcaagctacatcccgaagga
tttggctacccaaggagcaccgtagagttccagatggaaacgaggaatgactgtaaacag
ttctggaagagctgtgtagaacatcatgccttcttccgtctaacccagatcaagtatccc
agatcaaggaggcggctcttgagtagaggatcaacattcagatacagtggaaggacacag
aagcaagttgttgagcaggccagggttggaggaaactcaagatcattagtgacattaaat
gcttcaagaatgtcaacaagaagccttggtgctccaaggaccaccaccccacttaccatc
gacatgacagagacaatagtcactgatcatcatagtgcacctaacctggccttcccagat
gaccccacctatgccaaacccgacatgcctaagagtcctgtctccgagtcaccgacgtcg
cctccgtcgtcgactcccatcacgccagtccatgagaactcaaggattgccatccacaaa
ggccagtccaactcaagtatcatgtacgagtacacagtgaatgatgacaactcacagcag
cagaaccaggctgaagtggatccaagccaggcgagcaggctggccagttcttcaggttcc
ttcaatgccaggatggagccggagccgttggtgtcttcgggagagaccagactggatgcc
ctctcggatgcagagcccaagaggaatggagacatcaacatgggaggcaatcagagttct
cctgccccttcacccaccaaatctataccaacatacaacaatgatacatcagaagtagtc
tcatcaccagtctcaaaccatgaagaagagcctgtcaagaaaaagagacaccctcctgac
agggcatacttcattgccaaagagatcttgacaacagaaagaacatatctcaaagacttg
gaagtagttgtagtatggttccggaaagcgacaacgaacgaggccaatctaccagagacc
cttgacattctcttcagtcatttagatcctatttatgaattccattgtaaattcctcaaa
gaagtcgaacaacgcctttcatcatgggaaggcaggcccaatgcccagggcaaaggtggt
ttccagagagtaggtgatatacttctcaagaatgctcaacatttgaagctgtacacgggt
tatattggcaagcttgaagagatcctgagtgatctggaggcctcgctgagaaaaaacaag
aagtttgagtctttctatcgtgactttgagatccagaaggtctgctatctacccttcaac
acattccttctcaaacctgttcagaggctgttacactacaaactggtgctagaaaggctt
gtgaagcactatcaaccatcacatccagactacaaggattgcaaggctgccatgggagat
gtaggagacctgaccgcagacatcgaggacagtgtcaagaggattgagaacttccagaaa
ctgactgagctacagagagatctggtgggcatggatacgctcatacaaccaaataggcat
ttcatccgagagggttgccttcacaagctatcgcgtaagggataccagcagcggatgttc
tttctcttctcagatgtcttggtgtataccagcaaaggggtcacgcctaccaaccaattc
aaagttcatggccaaatccctctcaaaggagttgtgcttgaagacagtgagcttgaccgc
tctgttgcaaactgcttcacattatacggaggtaacaaaacggttgttatagcagcaagc
acaccggaagaaaaacttagatggatggaggatataaggctagcaatgagtatgtgccaa
gatgaccaacctacagatacattaagttcaccggaccaagattcagcgtttgaggaagca
gaagatgacgtatcatcaccgtccaagtctatagatcgtcaatcacaccatcgagctaat
acaaccgttcatgtttgttggcatcgtaatactagcgttagcatggcggaccatgtccag
gctgtagagaatcagctgagtggatttttgttgcgtaaattcaagaacagcaatggatgg
cagaagctgtgggttgttttcacaaacttctgtctcttcttctataaaagccatcaggac
gattaccccttagcgagcctcccccttctgggttactctgtgatgataccagctgaagaa
gatgacattcgtaaagactatgtcttcaagcttcaattcaagacccacgtctatttcttc
agggcagagagcgagtacacattcagcaggtggatggaagtgctaaaaagtgccacctat
tccagtaagatggagaatgatgtcatgtaa
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integrated database retrieval system
