Lytechinus variegatus (green sea urchin): 121429881
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Entry
121429881 CDS
T11173
Name
(RefSeq) DNA polymerase delta subunit 3-like
KO
K03504
DNA polymerase delta subunit 3
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03030
DNA replication
lvg03410
Base excision repair
lvg03420
Nucleotide excision repair
lvg03430
Mismatch repair
lvg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121429881
03410 Base excision repair
121429881
03420 Nucleotide excision repair
121429881
03430 Mismatch repair
121429881
03440 Homologous recombination
121429881
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lvg01009
]
121429881
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lvg03032
]
121429881
03400 DNA repair and recombination proteins [BR:
lvg03400
]
121429881
Protein phosphatases and associated proteins [BR:
lvg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121429881
DNA replication proteins [BR:
lvg03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
121429881
DNA repair and recombination proteins [BR:
lvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
121429881
MMR (mismatch excision repair)
DNA polymerase delta complex
121429881
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC27
DUF3598_N
Motif
Other DBs
NCBI-GeneID:
121429881
NCBI-ProteinID:
XP_041483071
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Position
16:2434520..2441386
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AA seq
407 aa
AA seq
DB search
MTKIAIVNEDGLDAVKSDMKEVLGQHVFSIQKSALKDNSSLFTTDYEITKQNITQTNRFS
GIQCESVEVRSLAELERNQQAQQKSTEKPKVNGFGNQNASSTSSKTTSSSSSASQKSKPK
KGSIEASFASQATKSKTQDSKNEKKDPPVKEKKKVEEKPKPKGMLAFMSQKKKEESPPTS
SGPAGDSQKDKKSPIKEEKDEEVDVEVNRKEKTEVKGGRSQRSHQADKKKKRLDLSDSES
DDERQKKTVARKRRRILQQEDSSSEEEEDEEEQDDMDDSPIPPTPPPVAQALQSDEEDEA
TPPSKGQSEERSSTGRRRIRKRVLKSKVTVDEEGCMVTEKVWESESTDASDDDVPPPAQK
PKPQPKKESRDSDEEDDKKGKKGKGKKSSPPSSKGKQSSLMSFFKKK
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagattgctatcgtgaatgaagatgggctagatgctgttaagtccgatatgaag
gaggtgttgggccagcatgtcttcagtatacagaagagtgccctcaaggacaacagctca
cttttcacaacagactatgaaatcaccaaacagaatattactcaaacgaacagatttagt
ggtattcaatgtgaatcagttgaagtaagatcgttagcagaattagagaggaatcaacaa
gcacaacaaaagtcaacagaaaaacctaaggtaaatggatttggcaatcagaatgcttca
agtacgtcatccaagacgacatcgtcgtcttcgtcagcgtcacagaagtcaaaacccaag
aagggctcaatcgaagccagctttgcctcgcaagcaacaaaaagcaaaactcaggattcc
aagaatgaaaagaaagatccacctgtcaaagaaaagaagaaggtagaggagaaaccaaag
ccaaagggtatgctggcattcatgagtcaaaagaaaaaggaggaatcgcctccaacgtcg
tcaggacccgctggagattcacagaaagacaagaagagtccaatcaaggaagaaaaagac
gaggaggtggatgtagaagtcaacaggaaagagaaaacagaggtcaaaggtggaaggtca
cagaggtcacatcaggcagacaaaaagaagaagagattagatctttcagattcagagtca
gatgatgaaaggcagaagaaaacggttgctaggaaacgaaggcggatcctccagcaggaa
gacagtagcagcgaagaggaggaggatgaggaggaacaagatgacatggatgatagccct
attccaccaaccccgcctcctgtggcacaggctctccaatcagatgaggaggatgaagcc
acgcccccatcaaagggccaatcagaggagaggtcatcgaccgggaggaggagaatcagg
aagagagtactgaaaagcaaagtcactgttgatgaagagggatgtatggtcacagagaag
gtatgggagagcgaatccaccgatgcaagcgacgacgacgtccctccaccggcacagaaa
cccaaaccacaaccaaaaaaagagagcagagattctgatgaggaagatgacaagaaagga
aagaaaggaaaaggaaagaagagctcgccaccgagcagtaaaggaaaacagtcttccctg
atgagcttcttcaagaagaaatga
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