Lytechinus variegatus (green sea urchin): 121430035
Help
Entry
121430035 CDS
T11173
Name
(RefSeq) general transcription factor IIF subunit 2-like
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121430035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lvg03021
]
121430035
Transcription machinery [BR:
lvg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
121430035
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
Motif
Other DBs
NCBI-GeneID:
121430035
NCBI-ProteinID:
XP_041483239
LinkDB
All DBs
Position
16:complement(22160867..22172684)
Genome browser
AA seq
247 aa
AA seq
DB search
MTSKMELDLTASARPIWLVKVPKYVAQRWEKSEKNGHIGKIRVGKKFGKPDISLVMDESV
AKTKLTPDDPDIPAEHKMQVMSALPGTMMVYSQGATDKLSVEGKVVERLECRPVGSDSYM
MMKRKQIELAHKPTKVTQQIKVRHVNAYKPIARHKNLAEYEKKKKEEGKKPRLEKEKLMD
ILFSAFENHQFYQLKDLSRITQQPVPFLKEVLQEIGIYHQRQPHKYMWELKPEYRHYKSQ
DNEMDTS
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccaagatggagctcgacttgactgcttctgcacgaccgatttggctggtcaag
gttccaaaatatgttgcacagcggtgggaaaaatctgagaagaatggacacattggaaag
atacgagtcgggaagaagtttggtaagcctgatatatcactggtcatggatgaatcggta
gcgaaaaccaaactaaccccggacgaccccgatataccggcggaacacaagatgcaggtg
atgagcgccctccctgggacaatgatggtctactcacaaggggctacagataaattatct
gtggaaggaaaggttgttgagagattagaatgcagaccagtcggaagtgattcatacatg
atgatgaaaaggaagcaaatagagctggcacacaagcccaccaaggtcacgcaacaaatc
aaagttaggcatgtcaatgcatacaagcctattgctagacataaaaaccttgctgagtat
gagaaaaagaagaaggaagaagggaagaagccccgtctggagaaggagaagttgatggac
atcttgttctctgcgtttgagaatcaccagttctaccagctaaaggatttatctaggata
acacaacaacctgtgccattcctgaaggaggtcttgcaagagatcggcatctaccaccag
cggcagccacacaagtacatgtgggagctcaaaccagagtatcggcattacaagtcacag
gataatgaaatggacacctcctag
DBGET
integrated database retrieval system
