Lytechinus variegatus (green sea urchin): 121430335
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Entry
121430335 CDS
T11173
Name
(RefSeq) peroxisome biogenesis factor 1-like
KO
K13338
peroxin-1
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121430335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121430335
Membrane trafficking [BR:
lvg04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
121430335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_lid_3
AAA_16
PEX-2N
NACHT
nSTAND3
RuvB_N
AAA_14
AAA_22
TIP49
AAA_33
AAA_5
Sigma54_activ_2
AAA_19
Bac_DnaA
AAA_29
ORC-CDC6-like
DUF815
T2SSE
AAA_lid_PRS2_C
Motif
Other DBs
NCBI-GeneID:
121430335
NCBI-ProteinID:
XP_041483550
LinkDB
All DBs
Position
16:21804873..21844574
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AA seq
1532 aa
AA seq
DB search
MSWSTDDIISKMFGMTKIATVDFNSNKNCFIVLPNSWAQEFRRKEVSVFELQWGDSGKGY
LSWSGEIGRSSLGASNNDASIQINGLLGNKLGLRHGQEVLMKQVTSVWSCYKLTVEPASV
DDWEILELNSSYIETRLLDQVRIVWTGQVIPVWIDKMCIFIKIASTEPEAPCVRLEQNTE
MIITPKNRLPQSNPPTPSKQDIHPGHGLLQTKNRSDSGSGSSSSEISGNSSVSGYISDFD
SMSSLSSGFEHNVWSYDTSHVSKSEGGTNNPSMPWEVDPVDIEGAIPWSYKIWRKLISFV
SREADINRVRRDCANEEDARRKMAAEFWKDVRIVARVQPMFNHKKNLKTSRRQREGSTSA
SSETSEDSKKDCSSLERSHRKTSNRFTRQMSLNSHVVKPREPFSVGSSNNPTLPGETDSL
SNLMQPTTVYLSSVGDSEFLWQYAANTEEGGSAPPSEYVTFLATMTKQPSPKERNEELKQ
KLLQESKKEQNNLASSNNTRNPSEVNEEPEISAGESEEKRDGKSSCIVRIIVHCHELKSH
CKKDSVNPYSSTVFQDKPTQWYIQIPDILRRQMGLELSAGVQLKPVVSPPSPIQSMILAP
LFDLKESMNETMILRAFNQWLTCVSCMISPIPIVQTGNLLSFPITPDFTGEFLLSVNHDV
KESSKESYYLLHPFVTRNAETALGPKPKIEKAAEGTGRQLPVRTIKELDEITKGFRLREL
GPMANLGREALEHLTATLTSRPLGRQLCASVPGQRHGGVLICGGRGSGKTTVAKAVCQEA
SEWPLLAFVKVVECHSLKGKGVDTIRKIWEEAFDEAAWRQPSVILLDDLDHVTAAPLGPE
QEMGPEATYNSRLAQVLKDLVTNEINEGSRIALLATCSSKKSIHQSLLSSRGLHLFQSCL
EISPLSKADRATLLTSVIHSKVEIDLQTLTQVDPNILSSKMDGFVASDLVTVTERAVHAG
SSREISLGHHASRIKGADGDHPSNEILLCQEDFETALHSYSPAALRDVPLHSAGELGWED
VGGLKGVKQDLVETLQLPAKYPELFASCPLRLRSGLLLYGPPGTGKTLLGGVVAKECGLN
FISIKGPELLSKYIGASEQAVRDLFTRAMSAKPCVLFFDEFDSLAPRRGHDSTGVTDRVV
NQLLTQLDGVEGLEGVYVIGATSRPDLIDPALLRPGRLDKCLFCPIPTAEERVEILQALA
RKMTLRSNVDLAAIASKLDHFTGADLKALLYNAQLEAIHSTLMQSDRRDSNLGLPLTSSL
HNCSMEADEWKLTFLETFSESDHGPYQEEASNINHRLASLSEAERALAATMKLTGDIDEM
DGEDDVEGDGFRGRRKDLRLDLRGGLTSSDLNGNMAGAGAMSKTLLTELMREDSESTEQD
ENPSPPEGSGFDAPMTEVPPTPSLPPDTPIAPPQSQQQRVVYMPTLRDGVVDPTPETREI
IGNEVDVIVENYARKLAGESMVGTSDNTMTEDVSVIRVSQNHLLRAAQGMKPSVSVAERQ
KYKQIYESFVKSRGGEFPQGQAAEATQKVTLA
NT seq
4599 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggtcaactgatgacatcataagcaagatgtttggaatgacaaagatagccact
gttgatttcaactccaacaagaactgcttcatagtccttccaaattcatgggcccaagag
ttcagaagaaaagaggtttctgtctttgagcttcagtggggtgacagtgggaaaggatac
ctgagctggtctggtgagatcggcaggtcctcactgggtgccagtaacaatgatgcttcc
attcagataaatggccttcttggaaacaaacttggtctgaggcatgggcaagaggtcctg
atgaagcaagtaacatccgtatggtcttgctataaactaaccgtggagccggcttctgta
gatgactgggaaatactggaattgaattcatcttatattgagactcgcctcttggatcaa
gtacggatcgtttggacagggcaagtgattcctgtctggatagataagatgtgtatcttt
atcaaaatagcgtcaacagaacctgaagccccatgtgtccgtttggaacagaacacggag
atgatcattaccccaaaaaaccgtcttccacagtcaaacccacctactccatcaaaacaa
gatatccatccaggacatgggctattacagacaaaaaaccgctccgattctggttcagga
agttcctcgtccgagatcagtgggaacagttcagtgtcgggttacatcagcgactttgac
tccatgagctctctgtcaagtgggtttgaacacaacgtgtggagctatgacactagccat
gtctcgaaatcggaaggagggaccaacaatcccagcatgccctgggaggttgacccagtc
gatatagagggcgctataccgtggtcctacaagatctggaggaagttgatctccttcgtg
tccagggaggcagatatcaaccgggtacgacgggactgtgcgaatgaggaagatgccaga
agaaagatggcagcagagttctggaaggatgttcggattgtagcaagagttcaacccatg
ttcaatcacaagaaaaacctgaagacttcaaggagacaacgggaagggtcaactagtgcc
agcagcgagacgtcagaagatagcaagaaagattgctcctccctggagagatcgcacaga
aagacaagtaatagattcaccagacagatgtccttgaactctcatgtggtgaagcctcgc
gagccatttagtgtggggtcatccaataaccctacattaccaggggaaacagactctttg
tcgaacctcatgcaacctaccactgtttacttgagctcagtaggggactctgaattctta
tggcaatatgcggccaacacggaagagggaggaagcgcacctccttcagagtatgtcact
tttcttgccactatgaccaagcagccatctcccaaagaacgcaacgaggaactgaaacaa
aagctcctacaggagtcaaagaaagagcagaacaatcttgcatcatcgaacaacacgagg
aacccttcggaagtaaatgaggaacctgagatcagcgctggtgaatctgaagagaagaga
gatggcaagtcatcctgcatcgtcaggatcattgtccattgccatgagctgaagtcccac
tgcaagaaggactctgtcaacccatattcttccacagtcttccaggacaaaccgacccag
tggtacatccagatccctgatatccttaggaggcagatgggactggagctatctgccggt
gtccagctcaaaccagtcgtcagtccaccctcacccatccaaagcatgatccttgcgcct
ctctttgatttgaaggagagcatgaatgagacgatgattctacgagctttcaaccaatgg
ctgacatgcgtgagctgcatgatctctccaatacccatcgtacaaactgggaatcttcta
agcttccccatcacgccagattttacaggtgaattccttctatcagtcaatcatgatgtg
aaagaatcctcaaaggaatcctactatcttctgcaccccttcgtgacgcggaatgcagag
actgccctcggaccaaagcccaagatagagaaggctgctgagggtactggtcgacaactt
ccagtcaggactatcaaggaattagacgagatcactaagggttttagactcagggagcta
ggaccaatggcgaatctcggcagggaagccctggagcacctcacagcaactctgacctcc
cgacccctaggtcgtcagctctgcgcttcggtccccggtcaaaggcacgggggagtgtta
atctgtggtgggcgtggctcggggaagaccacggttgccaaggcagtctgtcaggaggcg
tcggagtggccccttctggccttcgtcaaagtagtggaatgtcactctctgaaaggaaaa
ggagtcgatactatcaggaagatttgggaggaagcctttgacgaagcggcttggcgccaa
ccttctgtcatcttattggatgatctggatcatgtgaccgcggctcccctgggtccggag
caagagatggggccggaagccacgtacaactcgcgtcttgcccaagtcctcaaggatctt
gttaccaatgaaatcaacgagggtagtcgcatcgctctcctagccacgtgttcctccaag
aaatccatccaccaatctcttctgtcctccagaggtcttcacctctttcagtcctgtctt
gagatcagtcctctctccaaggccgatcgagcaaccctcctgacatccgtcatccactcc
aaggtggagattgaccttcaaactctgacccaggtcgatcctaacatcctgagctccaaa
atggatgggtttgttgcctcagaccttgtgaccgtgacagagagggcagtgcatgctggg
agctcaagagaaatatccctcggccaccacgcctctcgtataaagggggctgacggtgac
cacccctccaatgagattcttctgtgccaggaggactttgaaactgcattgcatagctac
tctcctgcagctctgcgggatgttccactccacagtgcgggggagttgggctgggaagat
gttggagggctgaagggtgttaagcaggatctggtggagactttacagcttccagcaaag
tatccagaattgtttgccagctgtcctctgagattacgatctggtcttcttctctatggt
cctccaggcactggtaagactctgctggggggtgtggttgctaaggagtgcggacttaac
ttcatcagcataaagggtcctgaactgttgagtaagtacattggagcgagtgagcaggca
gtcagggacctttttaccagagcaatgagtgccaaaccgtgcgtcctattctttgacgag
tttgattcattagcaccacgacgaggtcatgacagcacaggggtgactgaccgagtggtc
aatcaactcttgacccaactagatggagtagaagggctagaaggtgtgtacgtgattggt
gctacaagtcgacctgacctgatagacccggccctgttaagacctggtcgattggacaag
tgccttttctgtcctattccaacagctgaggaaagagtggagatcctgcaggctcttgcc
agaaaaatgaccttacgttccaatgtggacctagccgccatagcctcaaagctggaccat
ttcactggagctgacctgaaagccctgctctataacgcccaactagaggctattcacagc
accctcatgcagtctgaccgacgcgactcaaacctagggctccctctgacaagctcattg
cacaactgtagcatggaagccgacgagtggaagctgaccttcctggaaacgttctcggag
agcgatcacggaccctaccaggaggaagcctccaacataaaccatcgtctggctagcctg
tcggaggcagagagggcgctagcagcaaccatgaagctgaccggtgacatcgacgaaatg
gatggtgaggacgacgtcgagggggatgggttcagaggaaggagaaaggatctaaggttg
gacttgcgcggtggattgactagttcggatttgaacggcaacatggctggagctggggca
atgtcaaagacactgctcacagaactcatgagagaagattcagagtcaactgagcaagac
gagaatccatcgccaccggagggtagcggctttgatgcccccatgacggaggtgcctccg
accccatccctgcccccagacacacccatagcccctcctcagtcccagcagcagagagtt
gtgtatatgccaacccttagagacggggtagtggatcccacgccagagaccagggaaatc
atcggtaacgaggtcgatgtcatcgttgagaattatgcaaggaagctggcaggtgaaagt
atggttgggacgtcggacaacacaatgacagaagatgtatctgtgatcagagtgtctcaa
aaccacctcttgagggcagcacagggcatgaagccgtccgtatcagtcgcagagagacaa
aaatataagcagatttacgagtcgtttgtcaagtcaagaggaggtgagtttccacaaggc
caggctgcagaagctacccagaaggtcacacttgcctga
DBGET
integrated database retrieval system
