Lytechinus variegatus (green sea urchin): 121430336
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Entry
121430336 CDS
T11173
Name
(RefSeq) cullin-4A-like
KO
K10609
cullin 4
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03420
Nucleotide excision repair
lvg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121430336
09124 Replication and repair
03420 Nucleotide excision repair
121430336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lvg04121
]
121430336
03400 DNA repair and recombination proteins [BR:
lvg03400
]
121430336
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lvg04147
]
121430336
Ubiquitin system [BR:
lvg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
121430336
DNA repair and recombination proteins [BR:
lvg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
121430336
TCR (transcription coupled repair) factors
Cul4-CSA complex
121430336
Exosome [BR:
lvg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121430336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
HbrB
Motif
Other DBs
NCBI-GeneID:
121430336
NCBI-ProteinID:
XP_041483551
LinkDB
All DBs
Position
16:complement(21774037..21804722)
Genome browser
AA seq
811 aa
AA seq
DB search
MPLSSKEKIASCKTTLEANTRKRRASDNNHLHTKRAREDLGTGEHRQSSEGKNMGEATPK
RANFSALNPSNNGFNSRSSPLVNNKPGTSKKLVIKNFKVKPVLPANYQQQTWDRLKEAVQ
AIHKSRPIKYSLEELYQAVENMCSHKMSASLYDQLKEVCEQHVASQTKQFTSEMTDSLTY
LKQLNTCWQDHCRQMIMIRSIFLFLDRTYVLQNSLVSSLWDMGLDLFRSHIISNRTVQNR
TVEGLLMLIENERTGDVVDHSLLKSLLRMLSDLQIYEEAFEKRFLEATQMLYGAEGQRLV
HEREVPEYLIHVDKRLEEEAQRILHYLDHTTRKLLIACVEKQLLEDHIGTILQKGLDSLL
DANRVDDLTLLYRLLQRTKNGLLDLCQYFSAFIKKTGTTIVIDSEKDKTMVQELLDFKEK
LDNILETCFAKNEKFSISLKESFENFINKRLNKPAELVAKYVDNKLRAGNKEATEEELER
LLDKIMVLFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKQECGGAFTSKL
EGMFKDMELSKDIMVAFKQHMQHQCQTTVMDLSVNILTMGYWPTYKPLEIHLPSEMVNLQ
EQFKRFYLGKHSGRKLQWQPSLGHCLVKAQFREEGSSVKELQVSLYQTLVLLLFNEGDNF
SLEDIRQATNIEDSELRRTLQSLACGKARVILKQPKGREIEDGDKFVFAKDFKHKLFRIK
INQVQMKETVEEQVNTQERVFQDRQYQIDAAIVRIMKMRKSLSHNLLVSELYNQLRFPVK
PSDLKKRIESLIDRDYMERDKDNPNQYHYVA
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgcctctctcaagcaaagaaaagattgcctcatgcaagaccaccctggaggcgaacacg
cgaaagcgtagagcgtctgataacaatcaccttcacacgaagagagccagggaagatctc
ggcaccggcgaacacaggcagtcgtcggaaggcaaaaacatgggtgaagcgacgcccaaa
agagcgaacttttctgcattaaatccgtctaataacgggttcaatagcaggtcatcacct
ctcgtgaataacaaaccagggacctctaaaaagcttgttataaagaatttcaaagtcaag
ccagtcctcccagccaactaccagcagcagacatgggacagactaaaggaggccgtccaa
gccatccacaagagcaggcccatcaagtacagtctcgaggaactctaccaggcagtcgaa
aacatgtgctcacacaagatgtctgcctccctctatgaccagctcaaggaagtctgtgag
cagcatgtggcatcacagactaaacagtttactagtgagatgacggatagcctgacgtac
ctgaagcaactaaatacttgttggcaggatcattgtaggcaaatgatcatgatccggagt
atatttctgtttctggataggacgtatgtattacagaattcactagtatcatcactttgg
gatatggggctagatctctttcgatctcacatcataagcaacaggactgtacagaatcgg
accgtagagggcctcttgatgcttatagagaacgagaggacgggggatgtcgttgatcac
agtcttctcaaaagtcttcttcgaatgctctcagatctacagatctatgaggaagcattc
gagaagaggttccttgaagccactcagatgctgtatggtgctgaaggccagagactcgtc
catgagagagaggtaccagagtatctcatccacgttgacaagcgattagaagaagaagcg
cagagaattctgcattatttagaccacacaactaggaaacttctcattgcttgtgtagaa
aaacagctgctagaagaccacattggaaccattctccagaaaggtttggacagtctacta
gacgccaaccgggtagacgatcttacgctactctacagactgctacagaggacaaagaat
ggcctccttgatttatgtcagtacttcagtgcttttatcaagaaaaccggcactaccata
gtgatagactctgagaaggacaagacgatggtccaggaactcctcgacttcaaggaaaag
ctggacaacatcctggagacctgcttcgccaagaacgagaagttctccatctccctgaaa
gagtcctttgagaatttcatcaacaaaaggctcaacaaaccagctgaacttgttgccaag
tatgttgacaacaagctcagagccggtaacaaggaagctacagaggaagagcttgagaga
ctcctggacaagatcatggttctattcaggttcatccacgggaaggatgtgtttgaagca
ttctacaagaaagacttggccaagagactactagttggaaagagtgcgtcggtggatgct
gaaaaatccatgctatccaaactcaagcaagaatgtggtggtgccttcacatccaagcta
gaaggaatgttcaaagatatggaactatctaaggacatcatggtcgcattcaaacagcat
atgcaacaccaatgtcaaacgaccgtaatggatcttagtgtgaatatcctgaccatgggg
tactggccaacgtataaacctctggagattcatctaccgtcggagatggtaaatcttcag
gagcagttcaaacggttttaccttgggaagcacagtggtcgtaaactacaatggcaacca
agtctaggtcactgtctggtcaaggctcagttcagagaagagggctcatcagtgaaggag
cttcaggtttcactctaccaaacactagtcctgctcctcttcaatgaaggagacaacttc
tcactagaggatatcagacaagctactaacatagaggatagcgagctaaggagaacactt
cagtcattagcctgtggtaaggccagagtcatcttaaaacaaccaaagggtcgagagata
gaggatggtgacaagtttgtctttgccaaagatttcaagcacaaactcttcagaatcaag
atcaaccaagtccagatgaaagaaacggtggaggagcaggtaaacacccaggagagggtg
ttccaggatcgacagtaccagattgacgcagctatcgtcaggattatgaagatgcgcaag
tcgctcagccacaacctgctcgtctccgagctctacaaccagctaagatttccagtcaag
ccgtcagatctgaagaagagaatagagagtctcatcgatcgtgattacatggagcgcgac
aaggacaacccgaaccagtatcactacgtagcataa
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