KEGG   Lytechinus variegatus (green sea urchin): 121430485
Entry
121430485         CDS       T11173                                 
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM31-like
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
lvg  Lytechinus variegatus (green sea urchin)
Pathway
lvg03010  Ribosome
lvg04120  Ubiquitin mediated proteolysis
lvg04137  Mitophagy - animal
lvg04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:lvg00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    121430485
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    121430485
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    121430485
   04137 Mitophagy - animal
    121430485
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:lvg03011]
    121430485
   04121 Ubiquitin system [BR:lvg04121]
    121430485
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lvg04147]
    121430485
Ribosome [BR:lvg03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    121430485
  Archaea
    121430485
Ubiquitin system [BR:lvg04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   121430485
Exosome [BR:lvg04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121430485
  Exosomal proteins of colorectal cancer cells
   121430485
SSDB
Motif
Pfam: ubiquitin zf-C3HC4 Rad60-SLD zf-RING_UBOX zf-C3HC4_2 zf-C3HC4_4 zf-C3HC4_3 zf-RING_5 zf-RING_2 TBK1_ULD TRAF3_RING RING_XB3-XBAT31 zf-C3HC4_IRF-2BP1_2
Other DBs
NCBI-GeneID: 121430485
NCBI-ProteinID: XP_041483695
LinkDB
Position
1:37257228..37258499
AA seq 206 aa
MDSHQDFKSMYAKLVDSLNCAICQDVLKDARDLECGHTFCMACLGELVAIEGWTSNIQCC
LCQRKTSIRSGGVNGLKQNYKLNCILDEQASILKKMEASDVAVAATPGQQDSPEAPLQIW
VRDLEGKSQSFLVRTSDTADAFKRQVEKKIGIPPNVQRLLFQSKQLEGSTTLDEYGIGLH
STIELALPLKGGKVILAIHRLPNSVS
NT seq 621 nt   +upstreamnt  +downstreamnt
atggacagtcatcaagatttcaaatcgatgtacgcaaagcttgtagatagcctcaactgt
gctatctgccaagatgttcttaaagacgccagggatctagaatgtggccatacattttgc
atggcatgtctaggagagcttgtagctatagaaggttggacatctaacatccaatgttgt
ctctgccagaggaagacgagtatccgttccggcggtgtaaacggtctgaaacagaactac
aaactcaactgtatcctggacgaacaggcgtccatcttgaagaaaatggaagcttcggac
gtagccgttgctgcaacaccgggacagcaagattcaccggaagcaccactgcagatctgg
gtgcgtgacctcgaaggcaagtcgcagtcctttctagttcgtacgtcggacacggcagac
gccttcaagcgacaggtcgagaaaaagattggcattccacccaatgttcagcgtttgctt
ttccagagcaagcagctagagggctcgaccactttggatgagtacggcataggcctacat
tccacaattgagcttgccctacctcttaaagggggaaaagtgatcctagcaattcataga
ttaccgaatagtgtttcgtag

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