Lytechinus variegatus (green sea urchin): 121430686
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Entry
121430686 CDS
T11173
Name
(RefSeq) RB1-inducible coiled-coil protein 1-like
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121430686
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lvg01009
]
121430686
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121430686
03029 Mitochondrial biogenesis [BR:
lvg03029
]
121430686
Protein phosphatases and associated proteins [BR:
lvg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121430686
Membrane trafficking [BR:
lvg04131
]
Autophagy
Autophagosome formation proteins
ULK complex
121430686
Mitochondrial biogenesis [BR:
lvg03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
121430686
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
121430686
NCBI-ProteinID:
XP_041483964
LinkDB
All DBs
Position
17:complement(21457709..21498917)
Genome browser
AA seq
1488 aa
AA seq
DB search
MLYVFLVNTGEMLTLDMALTMESVQQLHDTLSDDYQIPYEKQVLLISGGQSLDPQMRVCS
YSAGTDTNPIFLFSKGTIESANPPVTTSMSQTKEDNLKLQVEGLKNLPPSYSAVVARTQL
ALQFHEVAKEKLRVCEGLIHNQHLQQQGWMAVIANLDDITSAFQQRALVFQQNIADFLTD
RPNFLQRLEEFGDIIHILEKTPLLPCLRDGDRSPCDHEERDVSLMMWISRQDQRSTLQQM
AVQCSKVLDQFNQPVLDALGSDIKSCLEAVSNPGMKEIKGLGERLFGLEQLLLQARKLLN
EQAEMAQGLVQNQTRASNVKDPSVLPDLCLSHQQQLTVMYKKHLQLIDMSRRCEIAKEEL
CQNLHVRLRWVMYVEQQVSSVHGKMLVYHENLKRLRKRLEIIRQVCMTPKLYASAVVEVC
RRRRYNTQYQEWSGRISETSVCEHAEELKRRKEFASLMHNHFLNALFPGFYELPPTFATT
PPGNYDNSLPNIMDKDILLLREKVPELAESLELPSNQHFSCVTSLHTKQLPSRPLSIEIE
TQTELLSEELSCHPPPSPPPQPLTENNAEAISDQTSKDDDSDGAITLEDGKDPRDRPGLE
SQLSQPRLLSLDMPQTNDIILSPDTPELDAKFESVYRDAPFSSLLPEVDSEFHSAIGSPM
DEGLVKKAKMDQILPVLRPMEENQTLKQQLQEREKILEELEERKMVLEKKLSDSESMIGD
LQESVSTRSQRLEESQNTVDCLNEVVQAHVTELRTKCESIKKSVVDTRQQMKKEVLEAVA
KITEYSHQVSKDSERRHVIVIQKAVDQTQAGLEKEKEVLSKQISDLNGQLEVANQKLMDL
ECKVREKESSSEMLKSKYQQDLEEVKTKMEEDEKQMIASMKMELEMEITDLEANIEEKEK
EIRQLQIESVQRQQETTAKLQEEKLQELDNLRKEMGALHKSELNKLEMALHSRHVDEFAD
FKRSSTLQTESELEKQRKHLMEERSEVIKTMEKEAEERLRTAREEMQASCQKTLEEEQKQ
GLDAMEKQKKEMEERTKEINDQKKKHEEEMRKIEDEWKEKFLKEFRELEELNERRMEEAR
RQHEVEMERRRTEETEGIERIKKEMQSQFETRLAEVTSSRDKHEAQVQNLQEVLSRLKAE
TCQKEEELNAKWAESIAVEKSSCVEAAVEEERKEGEKRLRALRERLEEEKQEGIRIAVEM
AKFEQSQNDAEQTASSSSTESTSSMASTSLSASQQQVSFNKAIAKVAATKDKRIAELEAR
ERELVEEQHRSKDTIEKLLMDKTDLDTELRAAVLKAQEREWQAIREKERLEERMRKSGDL
AAGNEDDRGSPAEMVVSTQSDGLMEVTETRDQLKALLHTKEQECSTLKRQLIHMRTSSPG
GRMEKVAISDISLGDLVFIFFQEGQENFMVYSLEPTLYFLHTESLSALGLRSKGQAVAKF
SWIIARITDKEYCQAKKAQNRFKVAVGTKFYRVKAIRYDPKVEHVPRK
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atgctgtatgtttttcttgtgaacacgggagagatgctgactcttgatatggctctcacg
atggagagcgttcagcagcttcatgatactctatcagatgactatcagatcccttatgag
aagcaagtcttattgatcagcggagggcagagtttagatccgcagatgagagtatgcagt
tacagtgctggcacagacactaaccccatcttcctgttcagtaaagggaccatagaatcg
gcaaatccgccagtgactaccagcatgtcacagacaaaggaagacaacctcaagcttcag
gtcgaaggactcaagaacctgcctcctagctacagtgctgtagtggcacgcacccaacta
gccctgcaattccatgaagtagccaaggagaaattgagggtctgcgagggattgatacac
aatcaacatttacaacaacaaggttggatggctgttatagctaacttggatgacattact
agtgcctttcaacaaagagcactcgtcttccagcagaacatagcagacttcctcactgac
agacccaactttcttcagcgccttgaagagtttggagacatcattcacatccttgagaag
acgcctcttctaccttgcctcagggatggtgatcggtctccatgcgaccatgaggagagg
gatgtatcccttatgatgtggatcagtagacaggaccagaggagtactctacaacaaatg
gctgtgcagtgtagtaaagtacttgaccagttcaatcaaccagtccttgatgccttgggc
agtgatattaaatcatgcttagaggctgtgagtaacccaggaatgaaagaaatcaaaggt
cttggagaaagactatttggtctagagcagctgttattacaagctcgtaaactcctcaat
gaacaggctgaaatggctcaggggcttgttcagaaccagacccgcgctagtaatgtgaaa
gacccctcagtgctaccggacctatgcctgagtcatcagcagcagctaacggtcatgtac
aagaagcatctacaactcatagacatgagcaggagatgtgagatagcaaaggaggagctc
tgtcaaaacctacatgtcagattaagatgggtaatgtatgtagagcagcaggtcagcagt
gtccatggtaagatgttggtataccatgagaacctgaagagactacgcaaacgtttggag
ataatccgtcaggtctgcatgacgccaaagctctacgcttctgctgtagtagaggtgtgc
aggagacgccgttacaacacacagtatcaagagtggtctgggaggataagtgagacatca
gtgtgtgaacatgcagaagaattgaagaggagaaaagagtttgcttcactcatgcataac
cacttcctcaatgcactcttccctgggttctatgaactgcctccaacgtttgcaacaaca
ccccctggtaactatgacaactccttacctaatatcatggacaaagatattcttctactc
agggaaaaggtgcctgaattagctgaaagtctagagcttccatccaatcaacacttctca
tgtgttacctcactacatactaagcagctgccatctcgtccactctcgatagagattgaa
actcagaccgaactcctttcggaggaactttcatgccatcctccgccctcaccgcctcca
cagcctcttactgaaaacaatgctgaagcgatctctgatcaaacatcaaaagatgatgac
tctgatggtgcaattacactcgaggatggcaaggatccaagggatagaccgggtttagaa
agtcaactcagccagccaagactgttatctcttgacatgcctcagacgaatgatattatt
ctgtctccagacacgccagagcttgacgcaaagtttgagtccgtttacagggatgctccc
ttctcgtctctgcttcctgaagtcgacagtgagtttcattcggcgatcggtagccccatg
gatgaaggtttggtgaagaaggccaagatggatcagatcctgccggttcttagacccatg
gaggagaatcagaccctgaaacaacagctccaagagagagaaaagatacttgaagagctt
gaagagaggaagatggtccttgagaaaaagctcagcgattcagaatccatgattggtgac
ctgcaggaaagcgtaagcactcggtcgcaacgtcttgaggaatctcagaacaccgttgac
tgcctgaatgaggttgttcaagcacatgttacagagcttagaacaaagtgtgagagtatc
aagaagtctgttgtagacaccaggcaacagatgaaaaaagaggttctagaagcagtggct
aaaatcacagaatattcacaccaggtcagcaaagattctgagagaagacatgtaatcgtc
attcaaaaagccgttgatcaaacgcaagcaggacttgaaaaagagaaggaggtgctcagc
aaacagatctctgatcttaatggacagttagaggtggctaatcaaaaattgatggacctt
gaatgcaaagtcagggagaaggagagcagttctgagatgctcaagtctaaataccaacaa
gaccttgaggaggtaaagacaaagatggaagaggatgagaagcagatgattgcatccatg
aagatggaattagagatggagatcacagacttggaagcaaacatagaggagaaagagaaa
gaaataaggcagctccaaatagaatctgttcagaggcagcaggaaacgactgcaaagctc
caagaagagaagctgcaggaacttgataacctgaggaaggagatgggggcattgcacaag
agtgagttgaataaacttgaaatggcattgcacagcagacatgttgacgagtttgctgac
tttaagagatccagtacattgcagacggagagtgagttagaaaaacagaggaagcatttg
atggaggagcgcagtgaagtcattaaaacgatggagaaagaagccgaggagagattgagg
acagctagggaagagatgcaggcatcttgtcagaagacactggaagaagaacagaagcaa
ggtctagatgcaatggaaaagcagaagaaagagatggaggagagaaccaaagaaattaat
gatcaaaagaagaagcatgaggaagagatgaggaaaatagaagacgaatggaaggaaaag
ttcctgaaggagttccgtgagttagaggaattgaatgagaggaggatggaagaagcaaga
aggcaacatgaagtggagatggaaagaagacggacggaagaaacagaaggtattgagagg
ataaaaaaggagatgcagagccaatttgagacaagacttgctgaggtgacatcctcaagg
gacaaacatgaagctcaagtgcagaaccttcaagaagttctatcacgactcaaggcggaa
acttgtcagaaggaggaggagcttaatgctaagtgggcggagtctatcgccgtggagaaa
agcagttgtgtggaggctgctgtggaagaggagaggaaagagggagagaaacggttaaga
gctttgagggagagactggaggaggagaaacaagaaggtatcaggattgcagtagagatg
gccaagtttgaacaaagccagaatgatgcagaacagactgcatccagttcttctaccgag
agcacatcttccatggcttccaccagtctatcggctagccaacaacaggtgtctttcaac
aaggctattgcaaaggtggctgccacaaaggataaacgtattgcagaactagaggctaga
gagagggaattggtggaggagcagcacagatctaaagacactattgagaagctattgatg
gacaagactgaccttgatacggaactaagagctgccgtactcaaggctcaagaaagggaa
tggcaggccatcagggagaaagagagacttgaagaaaggatgaggaagagcggggatctt
gctgcagggaacgaagatgacaggggtagtccagctgagatggtagtttctacacaaagt
gatggtctgatggaggttactgaaaccagagaccaactcaaagctttacttcataccaag
gaacaagaatgcagcaccctcaaaagacaactgatccacatgagaacatcatcaccgggt
ggtaggatggagaaagttgctatctcagatatcagtcttggagatttggtgttcatcttt
tttcaagaaggacaggagaacttcatggtgtacagtctagaaccaaccctgtatttccta
cacactgaatcactgagtgctctaggtctcagatcaaagggacaagctgtagcaaagttc
agttggatcattgctcgtattactgataaggaatactgccaagctaagaaggcccagaat
agattcaaggttgcagtaggtaccaagttctaccgcgtcaaggcaatacgctacgacccg
aaagtggagcatgtccctcggaagtga
DBGET
integrated database retrieval system
