Lytechinus variegatus (green sea urchin): 121430695
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Entry
121430695 CDS
T11173
Name
(RefSeq) transcription initiation factor TFIID subunit 2-like
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121430695
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lvg01002
]
121430695
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lvg03021
]
121430695
03036 Chromosome and associated proteins [BR:
lvg03036
]
121430695
Peptidases and inhibitors [BR:
lvg01002
]
Metallo peptidases
Family M1
121430695
Transcription machinery [BR:
lvg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121430695
Coactivators
SAGA/TFTC/STAGA complex
121430695
Chromosome and associated proteins [BR:
lvg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
121430695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
Peptidase_M1_N
Motif
Other DBs
NCBI-GeneID:
121430695
NCBI-ProteinID:
XP_041483978
LinkDB
All DBs
Position
17:complement(16334288..16383726)
Genome browser
AA seq
1223 aa
AA seq
DB search
MSKSGRKPDKSHETPRAFRLSHQILCITAINFNRRSIVGYTELHLLPLRAGANRIKINCK
QCMVYRVVINDHWDVTKTISYNDPTLSICQHEMKQRNLVFFSNRHQEAVASVSSDRGYGE
LIVKIPKAAMHLVNDYKTMRVSIEFSLENPSGGIHFVVPDEEDTTAERAAHMFTYSHENS
SRLWFPCVDSFSEPCTWKLEFTVDSAMMAVSSGELIETVYTPDMLKKTYHYILNVPTSAS
NIALAVGPFEIVVDPTMHEITHFCLPQLKPLLEHTTVFFHEVIEFYEETVGTSFPYTCYK
QVFVDEAYDDSQAYASMAIFSTNLLHSARIIDQTFETRRLLAEALASQFFGCYICPETWA
DAWLTKGITRYLTGLCLRKMFGTNEYRSQIYSELTELCKYEQETGGVVLHPYPMEETSTG
TKASTDSGGDGATPSSSNTAPSSAKGKPPVWGGNLHFPCAQPHTVSWRHWKMIKMKSHFI
MRLIEIRIGQELLLKVFNKLLSLATSASHQKFMSCAWSNMLISTSGFLKSISTVSGKDLK
LFINRWVCQGGMAQFRGNFHFNRKRNIVELELRQDPGRPGIIKYVGPLKVTIQELDGSFE
HTLQVEDNLTKGEITCHSKSRRHKKKKIPLKNGEEIDMDLSKMDPDSPVLWIRVDTEMTL
LREVIFDQPDYQWQCQLRYERDIVAQLEAVEYLKKFASLDTTSALSDIILQSGCYYKVRI
QAAFCYAQVSNELAETFSGHTALIAMFKKLFSSFSSEEIVRRNNFMDFRTYFIQKAIPKA
IGLIRNIHTMCPRESLAFLVDLIKYNDNAKNKFSDCYYRASLIDALSNTITPAVAMVNTS
VENLSPETKMVLEEVTRCLNLEKLLPCYQHTVTISCLRNIRLLQKNSHLPSEPTLFQTYA
QYGHFTKVRLAALEALVDYVKVEASADIFSWLLDIVEQDPVPVIKHKLLRMLIANPPFKY
KEQSNLSTEELIERLWAYMNSGTSHDARLRCDVVDFFYTLYGKTRPACLPLPELGFVVNL
KERTTAVNPAIMPDEADDDNYDDDDDMDSDNQGDSFVEVEGMSGPLGADRSLSPDMLSPR
IPKRESSSPIHVDVEGEDDFASLIKRERRGSEEGEFDPSPLDPIKVKGEIKEEESPLSPL
EPGEVDDSSRDSFSGVAKDTSIPGSPSSSHASLQRDDSRSSLFSDPGKMSSHQHHKKKKS
KHKHRHKHRHEKPERELQRSTTL
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaagtggaaggaaaccggataaatcccatgaaactccaagagcatttagattg
agccaccagatattatgcataacagcgatcaacttcaaccggaggtccattgttgggtac
accgagttacatctactgcctttgagagctggagcaaaccggattaaaataaactgcaag
caatgcatggtttacagggttgtaatcaatgaccattgggatgtgacgaagacaatcagc
tacaatgacccaaccctctcaatttgccaacatgagatgaaacaacggaatttggtattc
ttctcaaaccgccaccaggaggcagtagcgtctgtttcatcagatcgtggatatggagag
ctcatcgtcaagatccctaaggcagccatgcatctagtcaatgattacaagactatgaga
gtgagcattgagttctccttggagaatccatccggtggtattcactttgtggtgccagat
gaagaagacacgacggctgagagggcagcacacatgttcacatacagtcatgagaactcc
tcccgtctttggttcccctgcgtggactcgttctccgaaccgtgcacgtggaaactggag
ttcactgtagactctgccatgatggccgtatccagcggtgaactgatcgagacggtctac
accccagacatgctgaagaagacataccattacatcctcaatgtgcccacgtctgcgtca
aatattgccctcgctgttgggccatttgagattgtagtagatccaacgatgcatgagatc
acacacttctgcctgccacaactcaaaccactactggaacatacaacagtgttctttcat
gaggtgatagagttctacgaggagactgttgggactagcttcccttacacatgctacaag
caggtctttgttgacgaggcgtatgatgacagccaagcatatgcttccatggcaatattc
agcaccaacctgcttcactctgctcgcatcattgaccagaccttcgagacgcgacgtctg
cttgccgaggccctggccagtcagttcttcggctgttacatctgccccgagacgtgggcc
gatgcttggctgacaaagggtattaccagatacctgacagggctctgcctgaggaagatg
ttcggaaccaacgagtaccggtctcagatatattctgagctaacagagctctgcaagtac
gagcaggaaacaggaggcgtggtcctccacccctaccccatggaagagacatcaacaggt
accaaagcttccacagattcagggggtgatggagccacgccctcctcctccaacaccgcc
ccgtcctcggccaagggaaagccaccggtgtggggcgggaaccttcacttcccctgtgct
caaccgcatacggtctcttggaggcactggaagatgatcaagatgaagtcccacttcatc
atgaggctcattgagatcaggattggccaggagctactcctcaaggtcttcaacaaactt
ctgtcccttgcaacttcagcatctcatcaaaagttcatgagctgtgcgtggagcaacatg
ctcatctcaacgtcagggttcttgaagtcgatctcgacggtatctggcaaggacctgaag
ctgttcatcaaccgatgggtgtgtcagggtgggatggcacagttcagaggcaacttccat
ttcaacaggaaaagaaacattgtagagctagaactaagacaggatccaggcaggccggga
atcatcaaatatgtgggtcctctaaaggtcaccatccaagagcttgatggatcgtttgaa
catacgcttcaggttgaggacaaccttaccaagggagagatcacctgtcactcaaaaagc
agaaggcacaaaaagaagaagattccattgaagaatggtgaagagatagatatggacctc
agtaagatggatcctgattcgccagttctatggatccgggttgatactgagatgaccctt
ctgagggaggtcatctttgaccagcctgactaccagtggcagtgtcagctgagatatgag
agagatatagtagcacagctggaggctgtagagtatctgaagaagtttgccagcttggat
acgactagtgctttgagtgacatcatactccagtctgggtgttactacaaggtcaggatt
caggcggctttctgctatgcacaggtatccaacgagcttgctgagacattcagtggtcac
accgccctcattgccatgttcaagaaactcttcagttctttctcttcagaggagatcgtc
aggcggaacaacttcatggactttaggacctatttcatccagaaggccataccgaaagcc
atcggtctgatacggaacatccacaccatgtgtcctcgagaaagcttggcgttcttggtt
gatctcatcaagtacaatgacaatgccaaaaataagttctctgactgttactaccgagct
agcctgattgacgctctgtctaataccatcactcctgccgtggccatggtcaataccagt
gtagaaaacctctctcctgaaacaaagatggttttggaggaggtaacccgatgtttgaac
cttgagaagctcttgccttgctaccagcacaccgtcacaatcagctgcctcagaaacatc
cgcctcctgcagaagaacagccacctacccagtgaaccaacgctcttccagacctacgca
cagtatggccattttaccaaggtccgattggcagcactagaagctctggtggactatgtc
aaagttgaagccagtgctgatatattttcttggttgctagacatcgtagaacaagatcct
gttccagttatcaagcacaagttgcttaggatgctcatagccaacccaccattcaagtac
aaggaacagtccaatctcagcacagaagaactaatagaaagactctgggcttatatgaac
tctggtacatctcatgatgccaggcttcgttgtgacgtggtggatttcttctacaccctc
tatgggaagaccagacccgcttgtctaccattgcctgagcttggttttgtggtgaatctg
aaggagagaacgacggctgtaaatccagccatcatgcccgacgaagccgatgacgataac
tatgatgacgatgacgacatggatagtgacaatcaaggagactccttcgttgaggtagaa
ggcatgagtggtccgttgggcgcggaccgaagcttgtcaccagacatgctatctcctagg
atacctaaaagagagtcttcatctccgatccacgtggacgtcgaaggcgaagatgatttt
gcctccttaataaagagggaaagacgtggtagcgaggaaggtgaatttgacccttcaccc
ctcgatcctattaaggtcaagggtgagatcaaagaagaggaatctccactgtcaccctta
gaacctggtgaggtggatgatagttccagagacagcttctctggcgttgccaaggatacg
tccattccaggttccccatcctcctcccacgcaagcctacaaagagacgactcccgctcc
tcgttattcagtgatccgggcaagatgtcttcccatcagcatcataagaagaagaaaagc
aagcacaagcaccggcataaacaccggcatgagaaacctgagagagaattacagcgatcc
accactctgtga
DBGET
integrated database retrieval system
