Lytechinus variegatus (green sea urchin): 121430747
Help
Entry
121430747 CDS
T11173
Name
(RefSeq) intraflagellar transport protein 52 homolog isoform X1
KO
K19681
intraflagellar transport protein 52
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lvg03037
]
121430747
Cilium and associated proteins [BR:
lvg03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
121430747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IFT52_GIFT
IFT52_central
Itf52_C
ABC_transp_aux
DUF4350
OST48_N
ThuA
CHRDL_1_2_C
Motif
Other DBs
NCBI-GeneID:
121430747
NCBI-ProteinID:
XP_041484058
LinkDB
All DBs
Position
17:6461240..6490817
Genome browser
AA seq
430 aa
AA seq
DB search
MAPTTRDVGDKGQRTSIVFDVSKRELFSTQNGFKQLNKKLRSNWKIVSNKDEITDEKLSS
AKVFVIAGPRDKFTAPEFEAIKKYMENGGSVLVMVGEGGETKFDTNINFLLEEFGIMVNN
DCVVRTSYFKYFHPKEALVSNGILNRAISQAAGKSVPGSGDEDAQNDTQALTYLYPYGAT
LNVAKPASAILSTGTVCFPLNRPVCALHSSKYSKGKLAVLGSVHMFSDQYLEKEENNKIM
DVLFKWLTTDEVVLNAIDAEDPEISDYNFLPDTSKLADKLRTCLQENEDTPRDFNTLFDG
TVYSLDTKVVPKVVRAYEALNVKHENLALIQPQFEVPLPPLQPAVFPPAFRELPPPALDL
FDLDESFSSEKARLAQITNKCTDDDLEYYVRECGDILGISMIYIVILIHFYKQYYHSHHC
YHFVCSVIIV
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgaccactagggatgtaggagacaagggtcagcggacatccatcgtctttgat
gtgtcaaagagggagctattttcaacgcaaaatggattcaaacaactcaacaagaaactc
agatcgaactggaaaattgtcagcaataaagatgagatcactgatgaaaaattatcaagt
gccaaggtgtttgtgattgctggaccgagagacaaattcactgcacctgagtttgaggca
atcaagaaatacatggagaacggagggagtgtcttggtcatggtcggagaagggggagag
acaaagtttgacacaaacataaattttctcctggaggaatttggtattatggtcaacaat
gactgtgttgtcagaacgtcctacttcaaatactttcatccaaaggaagcattagtatcg
aatggaattttaaacagagcaatcagtcaagctgccggaaagagcgtaccaggtagtggt
gatgaagatgcacaaaatgatacacaagcattaacgtatctctacccatatggagcaacg
ctgaatgtagccaagcctgcctctgccatcttgtcaacgggaaccgtctgctttcctctc
aacaggcctgtctgtgcgttacactcgtctaagtactctaaaggaaagttggctgtcctt
ggatctgttcacatgttctctgaccagtatttggagaaggaggagaacaataagatcatg
gatgtactcttcaaatggcttaccacggatgaagtggtgctcaatgccatagatgctgag
gatccggagatatcagactataactttctaccggacacgtctaagctcgctgataaacta
cggacatgtttgcaggagaatgaggacacgcctagagatttcaacaccctgtttgatgga
accgtgtacagcctggacactaaagtggttcccaaagttgtcagagcgtatgaagcactc
aatgtgaagcatgaaaacctagcgctgatccaaccccaatttgaagtgccgctgcctcct
ctacaaccagcggtgtttccgccagcatttagggaacttcccccgccggccctagatctg
ttcgacctagatgaatcgttttcgtcagagaaagccagactggcgcagatcacgaataaa
tgcaccgatgacgatctggagtactacgtgcgggagtgtggtgatatcttggggatcagc
atgatatatattgttattcttattcatttctataagcagtattatcattctcatcattgt
tatcactttgtgtgcagtgtaatcattgtataa
DBGET
integrated database retrieval system
