Lytechinus variegatus (green sea urchin): 121430753
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Entry
121430753 CDS
T11173
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lvg04040
]
121430753
Ion channels [BR:
lvg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121430753
BRITE hierarchy
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GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
Ank_KRIT1
ANK_LRRK2
PAP2
DUF3754
Motif
Other DBs
NCBI-GeneID:
121430753
NCBI-ProteinID:
XP_041484073
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Position
17:complement(21372121..21428460)
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AA seq
1232 aa
AA seq
DB search
MMKRRSLGQILKANPKWNYLSGRTTPGDREDSNSCGNCSPSMEMNRKDFSGSMKKAKQSL
KMLQSMYKNPHAKEDCVVEDMETAPDSWDANEGLKESVQLSFDEFLTGLNLDPERLHALD
SKGASFLHHAAKAGRRDLVDYLVDRGLDINGVDEAGNTPLHWAVESGEAKIIDALIGIGA
RTNILNKLKMAPLHLACDINSVDSVEAICRQPDCEINIRGEFGQVPIHYCAMKDNFEAAK
KLIEFSPLLCMSDNNGVYPIHCAATHASRRVLDILLTEAEKCGYERWQLLSFTDKEKNTA
LHSAVNGGCETAVQVCLEFGAKLDVQQDNKCTPLHLACGQGALRIVEIMLSNYKTENTLE
MRDIEMMTPLHKAAMFDHVDVVRYLLDQGADIDAEDLENRTPLLLAASKRAWRSARLLLQ
KGANFFVKDAECRNVLHIAIIHGGNIRELRVFTDTQDTFASLLNERDSHGCTPMHYATQR
GNIVCVESLIDLGATVNLKNNSKQSPLHFAARYGRLNSIKRLLDSKIGPNIINDTDGEGM
TALHIAALHGHQKVVQLLLLRGALLHKDYKGRTPFHLAAMGGYKETMDILYSTHGHLLDQ
SDDCGNAPILLAAQEGQVNAVTYLLDHGAAVDIVNCAGDGIMDIVFDTHNKDVAVAIVLH
NRWDELLMCTLADNNPIDRLIQHMPDVFMRVLDKCQTVSDLEPGHPEYWRRYDFKYLQLP
VKCRRQWLKKYGEYHPLCTLNSMVKYNRVELLSHPVSTKFLDMKWKAYGALMHTLYTSIY
LVFLAILTSFVCTTDPKPQHSNLTSFNKTDLHMKRNETTDLQYICVIIIVLYCGLNILKE
FVQISQQKWRYFIDPTNYMEWALYVTAAMFVGPFLIRDDTPSYHSQWVFGAFAIFFAWFN
LLLYQQKLGNIGIYVVMFLHILKTLVRVMFVFMILVVAFGMSFYILMKQETNNAFEKPHY
AVIRVLTMMMGELDYINSFVLPIYDDDDYTQHYPEFSLIFLLALCVLLPILLMNLLIGLA
VGDIAAVQRDAQLKRLAMQVEQYTDVENRLPLRFIERVDKDFVLIYPNQQLGWMLKNCMH
LVTTLSAEEEEALRSSDSEFNPRHMHGEVSKLKRRLKNMSMMMDKQYELMRLVVQKMEIR
SEADEKDEGTCEEAFMMRPRSARLNLSQVVRLANAKGKASPRRQIPLKPDSAGRNSRPGS
AGRRSPASVISNISSRGSPSPTKMILPAEPSF
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaacgcaggagccttggacagatactaaaagcgaacccgaagtggaactacctc
tcaggccgaacgactcctggcgatcgggaggattcaaatagctgcgggaactgctcacca
agtatggaaatgaacagaaaggattttagtggctcaatgaagaaggcgaaacagtctctg
aagatgcttcaatcaatgtacaagaatccacatgctaaggaggactgtgtggtagaggat
atggaaacagcaccagatagctgggatgcaaacgaagggttaaaggagagtgttcagcta
agttttgacgagtttctaacagggcttaacttggacccggagcggctgcatgccctggat
agtaagggagctagcttccttcaccacgccgccaaggccggtcgaagggacctggtggac
tatctcgtagatcgtgggctcgatataaatggtgtagatgaggctggtaatacaccgcta
cactgggccgtcgagagtggggaagctaaaatcatcgatgccctcatcgggattggggct
cgaacaaacatactgaacaagttaaagatggccccccttcacctggcttgtgacatcaat
tccgtggactctgtagaggcaatttgccgtcaaccagattgtgagatcaacattcgcggt
gagttcggtcaagtacccatccactactgcgctatgaaagacaatttcgaagcagcaaag
aaactgatcgagttttctcccttgctgtgtatgagtgataacaatggtgtgtatccaatc
cactgtgctgctacccatgcatcgagaagagtattggatatattactaacagaagccgaa
aagtgcggctatgaacgatggcagctattgagttttacagacaaggaaaagaatacagca
ctgcattcagctgtgaacggcggttgtgaaactgccgttcaggtgtgcttagaatttggc
gccaaactcgatgtgcagcaggataacaaatgcactcctcttcacttggcctgcggtcag
ggagcactgcgcatcgtggagatcatgctctcaaattacaaaacagagaacactctagaa
atgcgagacatagagatgatgacaccgttacacaaagccgccatgtttgatcacgtggat
gtcgtcaggtatcttcttgatcagggagcagacatcgacgccgaagacctcgaaaatcgt
acgccactcctcctggcggcctcaaagcgtgcatggcggtcagcgagactccttctccag
aaaggcgccaacttcttcgttaaggatgcagaatgtcgtaacgtcctacacatcgccatt
atacatggtgggaatattcgggagctgagagtctttactgatacgcaagatacgtttgct
agtctactgaacgagcgagactcgcacggctgtacaccgatgcattacgccacccagcga
ggtaacattgtgtgcgtagaaagtctgatagatcttggtgctacggtcaatcttaagaac
aactctaaacagtcccctctacattttgctgccaggtatgggcgattaaattccatcaag
cgactcttagacagcaagataggaccaaacatcattaatgatactgatggggagggaatg
acagctcttcatattgctgccctccacggccatcagaaggtagtccaacttcttctcctg
aggggtgccctgcttcacaaggattataaaggcagaactccgttccatcttgctgccatg
ggagggtacaaggagaccatggatatcctatattcaactcatgggcacctcttagaccaa
agcgatgactgcgggaatgcaccaatccttctggccgctcaggaaggccaggtcaatgct
gtaacctaccttctcgatcacggtgccgccgtcgacatcgttaactgtgccggtgatggt
atcatggacatcgtctttgacacacataataaggacgtcgctgttgccatcgtcctacat
aatcgttgggatgagctgttgatgtgtacattagctgataataaccccatagaccgactc
attcaacatatgccagacgtattcatgagggtattggataaatgccaaacagtttctgat
ctagagcctggccatcccgaatactggaggcgttacgatttcaaatatctacagcttcca
gtaaaatgtcgtcgacaatggctcaagaaatatggagaatatcatccgctctgcactctg
aattctatggtcaaatacaaccgcgtagagctactatctcatcccgtctccaccaagttt
ctggacatgaaatggaaagcatatggagccctgatgcacacgctctacacatcaatatac
ctagtgttcctggcaatattaactagttttgtgtgcacaactgatccaaagccgcaacat
tccaacctcacatctttcaacaaaacggatttgcatatgaagagaaacgagaccacggat
ttgcaatacatctgtgtcatcattatagttttatactgtggactaaacattctgaaagaa
tttgtccaaatatctcaacagaaatggcgttatttcatagacccaactaactacatggaa
tgggcactgtacgtcaccgccgccatgtttgtcggaccattcctgatacgtgacgacact
ccatcgtatcacagtcaatgggtttttggagccttcgccattttctttgcttggttcaac
ttactcctctatcaacagaagcttggaaacattgggatctacgtggtgatgtttcttcat
attctcaagacattagtccgtgtcatgttcgtgttcatgatccttgtcgtggcgttcgga
atgtctttctacattcttatgaaacaagagaccaacaacgcatttgaaaagcctcattac
gctgtcatacgggtactgacgatgatgatgggcgaattagactacataaattcgtttgtt
ctccctatttatgacgatgatgattacactcaacattaccccgagttttcactcatcttc
ctccttgctctttgtgtgctgctgccaattttactcatgaacctcctgattggtctggca
gtcggtgatatcgcagcggtacagcgagacgctcagttaaagaggcttgccatgcaggtc
gaacagtacaccgacgtcgaaaaccgacttccattgagattcatcgagcgagtcgacaag
gacttcgttctcatctaccccaaccaacagcttggctggatgttaaagaactgcatgcat
ttggtgacaaccttgagcgccgaggaggaagaggctctgcgttcttctgactctgaattc
aaccccaggcatatgcacggagaggtatccaagctcaaacggagactgaagaatatgtca
atgatgatggacaagcagtatgaactgatgagattggttgttcagaagatggagatcagg
tcagaagctgatgagaaagacgaaggtacctgtgaggaggcattcatgatgagacctaga
tcagccagactaaacctcagccaagtcgttcgactagccaacgcaaaaggcaaggcaagc
ccaaggcgtcagatcccgttgaaaccggacagcgccggtcgcaacagtcgccctggttcc
gcaggtcgccgtagccctgcatcggtcatcagtaacatcagctcacgggggtccccttct
cctacaaagatgatcctacctgcagaaccatctttctaa
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