Lytechinus variegatus (green sea urchin): 121430802
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Entry
121430802 CDS
T11173
Name
(RefSeq) transcription initiation factor TFIID subunit 2-like
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121430802
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lvg01002
]
121430802
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lvg03021
]
121430802
03036 Chromosome and associated proteins [BR:
lvg03036
]
121430802
Peptidases and inhibitors [BR:
lvg01002
]
Metallo peptidases
Family M1
121430802
Transcription machinery [BR:
lvg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121430802
Coactivators
SAGA/TFTC/STAGA complex
121430802
Chromosome and associated proteins [BR:
lvg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
121430802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
Peptidase_M1_N
Motif
Other DBs
NCBI-GeneID:
121430802
NCBI-ProteinID:
XP_041484144
LinkDB
All DBs
Position
17:complement(18081945..18119577)
Genome browser
AA seq
1224 aa
AA seq
DB search
MSKSGRKPDKSHETPRAFRLSHQILCITAINFNRRSIVGYTELHLLPLRAGANRIKINCK
QCMVYRVVINDHWDVTKTISYNDPTLSICQHEMKQRNLVFFSNRHQEAVASVSSDRGYGE
LIVKIPKAAMHLVNDYKTMRVSIEFSLENPSGGIHFVVPDEEDTAAERAAHMFTYSHENS
SRLWFPCVDSFSEPCTWKLEFTVDSAMMAVSSGELIETVYTPDMLKKTYHYILNVPTSAS
NIALAVGPFEIVVDPTMHEITHFCLPQLKPLLEHTTVFFHEVIEFYEETVGTSFPYTCYK
QVFVDEAYDDSQAYASMAIFSTNLLHSARIIDQTFETRRLLAEALASQFFGCYICPETWA
DAWLTKGITRYLTGLCLRKMFGTNEYRSQIYSELTELCKYEQETGGVVLHPYPMEETSTG
TKASTDSGGDGATPSSSNTAPSSAKGKPPVWGGNLHFPCAQPHTVSWRHWKMIKMKSHFI
MRLIEIRIGQELLLKVFNKLLSLATSASHQKFMSCAWSNMLISTSGFLKSISTVSGKDLK
LFINRWVCQGGMAQFRGNFHFNRKRNIVELELRQDPGRPGIIKYVGPLKVTIQELDGSFE
HTLQVEDNLTKGEITCHSKSRRHKKKKIPLKNGEEIDMDLSKMDPDSPVLWIRVDTEMTL
LREVIFDQPDYQWQCQLRYERDIVAQLEAVEYLKKFASLDTTSALSDIILQSGCYYKVRI
QAAFCYAQVSNELAETFSGHTALIAMFKKLFSSFSSEEIVRRNNFMDFRTYFIQKAIPKA
IGLIRNIHTMCPRESLAFLVDLIKYNDNAKNKFSDCYYRASLIDALSNTITPAVAMVNTS
VENLSPETKMVLEEVTRCLNLEKLLPCYQHTVTISCLRNIRLLQKNSHLPSEPTLFQTYA
QYGHFTKVRLAALEALVDYVKVEASADIFSWLLDIVEQDPVPVIKHKLLRMLIANPPFKY
KEQSNLSTEELIERLWAYMNSGTSHDARLRCDVVDFFYTLYGKTRPACLPLPELGFVVNL
KERTTAVNPAIMPDEADDDNYDDDDDMDSDNQGDSFVEVEGMSGPLGADRSLSPDMLSPR
IPKRESSSPIHVDVEGEDDFASLIKRERRGSEEGEFDPLPLDPIKVKGEIKEEESPLSPL
EPGEVDDSSRDSFSGVAKDTSIPGSPSSSSHASLQRDDSRSSLFSDPGKMSSHQHHKKKK
SKHKHRHKHRHEKPERELQRSTTL
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaagtggaaggaaaccggataaatcccatgaaactccaagagcatttagattg
agccaccagatattatgcataacagcgatcaacttcaaccggaggtccattgttgggtac
accgagttacatctactgcctttgagagctggagcaaaccggattaaaataaactgcaag
caatgcatggtttacagggttgtaatcaatgaccactgggatgtgacaaagaccatcagc
tacaacgacccaaccctttcaatatgccaacatgagatgaaacaacggaatttggtattc
ttctcaaaccgccaccaggaggcagtggcatctgtttcatcagatcgtggatatggagag
ctcatcgtcaagatccccaaggcagccatgcatctagtcaatgattacaagacgatgaga
gtgagcattgagttttccttggagaatccgtccggtggtattcactttgtggtgccagat
gaagaagatacggcagctgagagggcagcacacatgttcacatacagtcatgagaactcc
tcccgtctttggttcccctgcgtggactcgttctccgaaccgtgcacgtggaaactggag
ttcactgtagactctgccatgatggccgtatccagcggtgaactgatcgagacggtctac
accccagacatgctgaagaagacataccattacatcctcaatgtgcccacgtctgcgtca
aatattgccctcgctgttgggccatttgagattgtagtggatccaacgatgcatgagatc
acacacttctgtctgccacaactcaaaccactactggaacatacaacagtgttctttcat
gaggtgatagagttctacgaggagactgttgggactagcttcccttacacatgctacaag
caggtctttgttgacgaggcgtatgatgacagccaagcatatgcttccatggcaatattc
agcaccaacctgcttcattctgctcgcatcattgaccagaccttcgagacgcgacgtctg
cttgccgaggccctggccagtcagttcttcggctgttacatctgccccgagacgtgggcc
gatgcttggctgacaaagggtattaccagatacctgacagggctctgcctgaggaagatg
ttcggaaccaacgagtaccggtctcagatatattctgagctaacagagctctgcaagtac
gagcaggaaacaggaggcgtggtcctccacccctaccccatggaagagacatcaacaggt
accaaagcttccacagattcagggggtgatggagccacgccctcctcctccaacaccgcc
ccgtcctcggccaagggaaagccaccggtgtggggcgggaaccttcacttcccctgtgct
caaccgcatacggtctcttggaggcactggaagatgatcaagatgaagtcccacttcatc
atgaggctcattgagatcaggattggccaggagctactcctcaaggtcttcaacaaactt
ctgtcccttgcaacttcagcatctcatcaaaagttcatgagctgtgcgtggagcaacatg
ctcatctcaacatcagggttcttgaagtcgatctcgacggtatctggcaaggacctgaag
ctgttcatcaaccgatgggtgtgtcagggtgggatggcacagttcagaggcaacttccat
ttcaacaggaagagaaacattgtagagctagaacttagacaggatccaggcaggccggga
atcatcaaatatgtgggtcctttaaaggtcaccatccaagagcttgatggatcgtttgaa
catacgcttcaggtcgaggacaacctaaccaagggagagatcacatgtcactcaaaaagc
agaaggcacaaaaagaagaagattccattgaagaatggtgaagagatagatatggacctc
agtaagatggatcctgattctccagttctctggatccgggtcgacactgagatgaccctt
ctgagggaggtcatctttgaccagcccgactaccagtggcagtgtcagctcagatatgag
agagatatagtagcacagctggaggctgtagagtatctgaagaagtttgccagcttggat
acgactagtgctttgagtgacatcatactccagtctgggtgttactacaaggtcaggatt
caggcggctttctgctatgcacaggtatccaacgagcttgctgagacattcagtggtcac
accgccctcattgccatgttcaagaaactcttcagttctttctcttcagaggagatcgtc
aggcggaacaacttcatggactttaggacctatttcatccagaaggccataccgaaagcc
atcggtctgatacggaacatccacaccatgtgtcctcgagaaagcttggcgttcttggtt
gatctcatcaagtacaatgacaatgccaaaaataagttctctgactgttactaccgagct
agcctgattgacgctctgtctaataccatcactcctgccgtggccatggtcaataccagt
gtagaaaacctctctcctgaaacaaagatggttttggaggaggtaacccgctgtttgaac
cttgagaagctcttgccttgctaccagcacaccgtcacaatcagctgcctcagaaacatc
cgcctcctgcagaagaacagccacctacccagtgaaccaacgctcttccagacctacgca
cagtatggccattttaccaaggtccgattggcagcactagaagctctggtggactatgtc
aaagttgaagccagtgctgatatattttcttggttgctagacatcgtagaacaagatcct
gttccagttatcaagcacaagttgctaaggatgctcatagccaacccaccattcaagtac
aaggaacaatccaatctcagcacagaagaactgatagaaagactctgggcttatatgaac
tctggtacatctcatgatgccaggcttcgttgtgacgtggtggatttcttctacaccctc
tatgggaagaccagaccggcttgtctaccattgcctgagcttggttttgtggtgaatctg
aaggagagaacgacggctgtaaatccagccatcatgcccgacgaagccgatgacgataac
tatgatgacgatgacgacatggatagtgacaatcagggggactccttcgttgaggtagaa
ggcatgagtggtccgttgggcgcggacagaagcttgtcaccagacatgctatctcctagg
atacctaaaagagagtcttcatctccgatccacgtggatgtcgaaggcgaagatgatttt
gcctccttaataaagagggaaagacgaggtagcgaggaaggtgaatttgaccctttaccc
ctcgatcctattaaggtcaagggtgagatcaaagaagaggaatctccactgtcaccctta
gaacctggtgaggtggatgatagttccagagacagcttctctggcgttgccaaggatacg
tccattccaggttccccatcctcctcctcccacgcaagcctacaaagagatgactcccgc
tcctcgttattcagtgatccgggcaagatgtcttcccatcagcatcataagaagaagaaa
agcaagcacaagcaccggcataaacaccggcatgagaaacctgagagagaattacagcga
tccaccactctgtga
DBGET
integrated database retrieval system
