Lytechinus variegatus (green sea urchin): 121430824
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Entry
121430824 CDS
T11173
Name
(RefSeq) trafficking protein particle complex subunit 12-like
KO
K20309
trafficking protein particle complex subunit 12
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lvg04131
]
121430824
Membrane trafficking [BR:
lvg04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
121430824
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Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_12
TPR_1
ANAPC3
ARM_TT21_5th
TPR_17
Coatomer_E
ARM_TT21_2nd
RPN7
TPR_11
ARM_TT21_4th
TPR_CcmH_CycH
Paf67
TPR_PSMD3_N
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
121430824
NCBI-ProteinID:
XP_041484171
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Position
17:complement(4769276..4840114)
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AA seq
825 aa
AA seq
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MAGTEKTAQDDDVSKTDPKPFDASLFFQSEANKPSSPSFPVESPFMEHPTGTPQINMEQS
NDKTRGNEEEGMGQNKPGLQEPVVKDTQPSVASFFAKDQDLTQSSGSFFDSFASARGDEN
DLFSTPPSSIGATPVSPEGGEFMKDPLGLSDVVPTNMVDIAGNNSETVSIDSTNLLTEED
AKMGSGSNMDTMSMDSTNLLSEEDKDDQSIDQGNESFESKNDLMGDGEVESVKGRLETTT
ISLESPETEARVIEEGTHSAAAMSDQGVKDVAAPAAGGKPLETVSDQVTIDAGTSFGVED
DNTIPDAQVGSPYESSTTESHLSTTPPLSHTSQEDTVTDSTDSLGVPPPLVSSFSAPSGL
VNPNHVRPHVPFQSTASQEDDDPFVEALRTSESDRRHDAWIPSEATQRILENRSIAQQGS
EYVIRDQLTMPGIIVEEPQGDPIKELVQRYMGEQESSKRSVLTVNQVTRDEHGLKRLLDA
GCLRAAVELTGLLLTSGGQGKGQAGMPSRHTPHLMQVWFTRISVLIKLQQFTAAEQELDA
FGTMDKPDLFYGYYPDLYPGRQGSMVPFSFRLIHAELAMHVGKHQLCLDRLSAILSVCQK
ILQNLRDGKSEYGRSIELSEENRKASLILWESRQIRVLHSVGNCLVSMKEYMQAVNVFKS
LVKKEPENEINIMSGIARVYLQLGDLKSAQDVYSEIEKKITAAGSSVKNARIHINRGFLK
VAQNQYADGYKHFNEALKIDPTNFMAINNVSVCCLYLGKLKEALSLLENLVNKDSSEFLD
ESLIFNLCTLYELESSKSIVKKQNLLSLVSKHKGDGFNVSCLKMP
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggctgggactgagaaaactgcacaagacgatgatgtttccaaaacagatcccaagccc
tttgatgcaagccttttctttcaaagtgaagcaaacaagccctcctcaccaagttttcct
gtagagagtcccttcatggagcatcctactggtacacctcaaatcaatatggaacaatct
aatgataagacaagaggaaatgaagaggaagggatgggtcagaacaaacctggtctgcag
gaaccagttgtaaaggacacgcagccatcagtagcaagcttctttgctaaagaccaggac
ttgactcagagttctggaagcttctttgattcatttgccagtgcgcgcggagatgagaac
gacttgttttcaacaccaccctcatccattggagcgacaccggtgtcaccggaaggtggg
gagtttatgaaggatcctctaggcttatcggatgttgtcccaacgaatatggtagatata
gctggaaataacagcgagacagtgagcattgactccacaaatctgctcactgaagaagat
gctaagatggggagtgggagtaatatggacacaatgagcatggattcaacgaaccttttg
tcagaggaggacaaagatgatcaaagcattgatcaagggaatgagagctttgaatcaaag
aatgacctgatgggggatggagaagtagaatctgtgaagggaagacttgagacgacgacg
atctcccttgagagtcccgagaccgaggcaagggtgattgaagaaggtacacacagtgct
gcagccatgtcagaccaaggtgtcaaggatgtagcagctcctgctgctggaggaaaacct
ttagagactgtttctgatcaggtcacaattgatgctggcacaagctttggtgtcgaagat
gataataccattcctgatgctcaggtgggatctccttatgaatccagcactacagaatca
catctgtcaactacaccaccactatcacacacttcccaagaagatactgtcactgactca
acagattcacttggcgttcctccaccccttgtctcatccttcagtgctccttctggtctt
gtcaatcccaaccatgtcaggccacacgtgccgtttcagtccaccgcatcccaagaagat
gatgatccatttgtggaagcactccgaaccagtgagagcgatcgtcggcacgatgcatgg
ataccatcagaagccactcaaaggatcttggagaatcgtagtatcgctcagcaaggatca
gaatacgtgatcagggatcagcttaccatgcctggtataattgttgaagagccacagggt
gatccaatcaaagagcttgttcagagatacatgggtgaacaggaatcatcaaagagatcc
gtgctcactgtgaatcaagtcacgagagatgaacatggactaaagaggttattggatgca
gggtgtctacgtgctgcagttgaactaacaggtctactattaacctctggaggtcaggga
aaaggtcaagctgggatgccttcgagacacacccctcatctaatgcaggtatggtttacc
aggatttcagtgttgataaagctacagcagttcaccgcagcagagcaagaattagatgcg
tttggtacaatggataagcctgatctattctatggctactacccagacctctaccctggc
agacaaggttctatggtgcctttttcatttcgtttgatccatgccgagttggctatgcat
gtgggcaagcaccaattgtgtttggatagactctctgccattttatctgtttgtcaaaag
attcttcagaatctcagagatgggaagtcagaatatggacgatctatagagctctcggaa
gagaatagaaaagcatctttgattttgtgggaaagtagacaaattcgagtgcttcattca
gtaggaaactgcctagtcagtatgaaggagtacatgcaagcagtgaatgtgtttaagtca
ttggtaaagaaagaaccagagaatgaaatcaacatcatgagcggtattgccagggtctat
cttcagcttggagacttaaagtctgcccaagatgtgtacagtgagattgagaagaagatt
accgctgctgggtcttcggtcaaaaatgctagaatacatatcaacagaggttttctgaaa
gtagcccagaatcagtatgcagacggctacaagcatttcaatgaagcactcaagatagac
cctacaaacttcatggccattaacaatgtctcggtatgctgcctgtacctcggcaaacta
aaggaggcactctcacttcttgagaacctggtgaacaaagatagcagcgaattcttagac
gagtctctcatcttcaatctctgcacgctttatgaattggagtcgtcaaagagcatcgtc
aaaaaacagaaccttctaagtcttgttagtaagcataagggggatgggtttaatgtcagt
tgtcttaaaatgccatag
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