Lytechinus variegatus (green sea urchin): 121431035
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Entry
121431035 CDS
T11173
Name
(RefSeq) elongation factor 1-alpha 2-like
KO
K03231
elongation factor 1-alpha
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121431035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvg03019
]
121431035
03016 Transfer RNA biogenesis [BR:
lvg03016
]
121431035
03012 Translation factors [BR:
lvg03012
]
121431035
04131 Membrane trafficking [BR:
lvg04131
]
121431035
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lvg04147
]
121431035
Messenger RNA biogenesis [BR:
lvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
121431035
Transfer RNA biogenesis [BR:
lvg03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
121431035
Translation factors [BR:
lvg03012
]
Eukaryotic type
Elongation factors
121431035
Membrane trafficking [BR:
lvg04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
121431035
Exosome [BR:
lvg04147
]
Exosomal proteins
Proteins found in most exosomes
121431035
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Septin
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
121431035
NCBI-ProteinID:
XP_041484470
LinkDB
All DBs
Position
1:complement(12521020..12569572)
Genome browser
AA seq
462 aa
AA seq
DB search
MVKEKIHINIVVVGHVDSGKSTTTGHLIYKCGGIDKRAIEKYEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFDTEKFKITVIDAPGHRDFIKNMITGTSQADCALLIVAAGV
GEFEAGITQNGQTREHALLCYTLGVKQLIVCVNKMDSSAPPYSESRFNEIVKEVTAYIKK
VGYDTKAIPFIPISGWHGDNMLEPSANMPWFKGWKITRKAGDASGITLFQALDAIVPPSR
PTEKPLRLPLQDVYKIGGIGTVPVGRVETGKLKPGIVVTFAPPNITTEVKSVEMHHESLQ
EALPGDNVGFNVKNVSVKDIKRGNVCGDSKNDPPKEASEFKAQVIIMNHPGQIHSGYAPV
LDCHTAHIACKFQVLLEKIDRRSGKVIELNPKSVKSGDAAIVTMVPQKPMVVESFVEYAP
LGRFAVRDMKQTVAVGVVKAVEKKESTGKVTKSAQKATGKKK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagaaaagattcatatcaacatcgtggttgtcggccacgtcgactccgggaaa
tctaccactaccggtcatctcatctacaagtgtggtggaatcgacaaacgtgccatcgaa
aagtatgagaaggaagctgccgagatgggaaagggatctttcaagtatgcctgggttctc
gacaagctgaaggcggaacgtgagcgtggtatcaccatcgacattgctctctggaaattt
gacacagagaagttcaaaatcactgtcattgatgctcctggccatcgtgatttcatcaag
aacatgattactggaacctcacaggccgactgtgctctgttaatcgtagctgccggtgtt
ggcgagttcgaagctggtatcacccagaatgggcagactcgtgagcatgccttgctgtgc
tatactttgggagtcaaacaactcatcgtctgtgtgaacaagatggatagttcggcgccc
ccgtattccgagagccgtttcaatgagattgtaaaggaagtcactgcctatatcaaaaaa
gtgggctatgataccaaggctatcccctttattcccatctctggatggcacggtgataac
atgcttgagccttctgcaaatatgccttggttcaaggggtggaagataacacgtaaggct
ggagacgcaagtggaattaccctttttcaagcacttgatgccattgtacccccttcgagg
ccaacagagaagcctcttcgacttcctctccaagatgtctacaagattggaggtattgga
actgttccagtcggtcgtgttgagacaggaaagttgaaacctggtattgttgttactttt
gccccacccaatatcactactgaagtgaagtctgttgagatgcaccatgaatcactacaa
gaggctttgccaggtgacaacgttggtttcaatgtcaagaacgtctcagtaaaggatatc
aagaggggtaatgtctgcggagacagcaagaacgaccctccaaaggaagcatcggaattt
aaggcacaggtaatcatcatgaaccatcctggacagattcattctggctatgccccggtt
ttggattgccacactgctcacattgcctgcaagtttcaagtactcctagagaagatcgac
cgtcgatcaggcaaggttatcgagctaaacccaaagtctgtgaagtccggtgacgcagcc
attgttacaatggttcctcaaaagccgatggtggtcgagagcttcgtggaatatgctcct
cttggtcggtttgctgtacgcgacatgaagcagaccgttgctgtaggtgtggtgaaggct
gtcgagaagaaagaatcgacaggcaaggtgaccaagtctgctcagaaggctactggcaag
aagaagtaa
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