Lytechinus variegatus (green sea urchin): 121431040
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Entry
121431040 CDS
T11173
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1-like isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lvg04040
]
121431040
Ion channels [BR:
lvg04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121431040
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GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
DUF3447
DUF2630
Motif
Other DBs
NCBI-GeneID:
121431040
NCBI-ProteinID:
XP_041484437
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All DBs
Position
17:complement(13313631..13361112)
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AA seq
1129 aa
AA seq
DB search
MEFILEKGGELEAFDGQGNTALHWAAEKGQAAAIDFLILKGISPNPMNHQCMTPLHTACD
LDVADSVDALCKHRPLVDIDCSGELGQTPLHYCAVRDSVNAARKLLEFTPALSRPDQNGV
YPIHAAATHASARVMELLFVESERPGSDRSSLLTVTDKEGNSALHSAVNSGDFAAVKLCL
KYGARIDIQQADKSTPVHLASSQGALDMVQLMFNSQDENRKSLRLKDVQNQTPLHKAAMF
DHAEVVTYLINEGSDYNAKDRQCRTPLLLATARGAWRAVRTLLQRGADFTQTDCDKRNVL
HLALLHGGNLDFFGREFFKQKEGALELLNQRDCSGCTPMHYATQQGNIKSVQGLIDLGAT
VNLKNKEKQSPLHFAARYGRLNSCKRLLDSAIGPHILNESDGAGRTALHIASWSGHVKLV
QLLLSKGALLHRDHEGRTPLHLAAVEGYINTMKGLLATHPHLMNQTDDEGNTALHLAARA
GQAAVVTFLLDSQAALLRNNSDQSCMEVAIECRNKDVAMAFVMNERWHEAMDDCGERKAP
HMLGLIEQLPEVAYTVLERCQTEKKADEEDPRSRRNYDFTYLRCTKDKQSKFLNSEEGFV
PLLVLNTMVKFNRINLLSHPVCVNYLAMKWNAYGRACHVTNITIYLVFVFFLTYFVCITD
VPDSFRVANRTSFEDSQSVEEYLRLPYADFTMSTIVAVWVICGFASMNILKEIVQLLQQA
SITGKGRYFYEFTNLLEWTLYATSLAFVAPYLAGENKDFQWQCGAIAVFLAWFNFLLYLQ
RFDIFGIYVVMFLEILRTLVQVLLVFSILIVAFGLTFHILLPREDNHAHNTPAMSLLRVS
TALLLGELDFINSFVDPLNDGDNVTMPYPELTYFFLIGLVLLMPILLMNLLIGLAVGDIA
SMQHNAHLKRLAMQVELHTDLEQKLPARILKAGERDQYTVYTHTAKYFILRARERGKYFF
YIKMLQYFIYRIWNKIRETAGMEGNAIGSKMGGDAANDPQLVILQNEMISQKRRLKEVKE
QLDRQYDLLRLIVQKMEIRSEAEDRDEGEGPGGENGRWFPSSNYCTDFSQFMSARSSRRS
SLASVGVGTVVRQDSAPTVPTRSSPSSVRASSTWSLPRTRLLSSSESMI
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atggagtttatactcgagaaaggaggagaattggaagcctttgatggtcaaggaaacact
gccttgcactgggcagcagagaagggccaggcagcagctattgatttcctcatactcaaa
ggcatcagtccgaaccccatgaaccatcagtgtatgacacctctgcatacagcatgtgat
ctagatgttgcagactcagtcgatgcattatgcaaacatcgaccactggtagatatagac
tgttcgggagagttgggtcagacacctcttcattactgcgcagttagagatagtgtgaac
gccgcaagaaaactgcttgaatttaccccagctctttctcgacccgaccaaaatggcgtt
tacccgatccatgctgctgctacccatgcctctgccagggtgatggaacttctcttcgtg
gaatcggagaggccaggcagtgatcggtcatcgctcctcacggtgacagataaggagggc
aactcggccctccattcggccgtcaacagcggggacttcgctgcagttaaactctgcctt
aaatacggagcgagaattgatatacaacaggctgataagtcaacgccagtgcacttagca
tcatctcaaggcgctcttgatatggtccagctcatgttcaactctcaagatgaaaacaga
aaatcacttcgactcaaggatgtacaaaaccaaacacctttacacaaggccgccatgttt
gatcatgcagaagtggtgacgtatctgataaatgagggaagtgattacaatgccaaggat
cgacaatgccgtacacctctgcttctcgctactgcacgaggtgcctggcgcgcagtccgt
acgctgctccaacgaggtgcagactttacacagacagattgtgacaagcgaaatgtacta
catctggcgcttctccacgggggcaatctggatttcttcggtagggagtttttcaagcag
aaagaaggagcattggaactgcttaaccagcgggactgttcgggctgtacaccgatgcac
tacgccacccaacagggcaatatcaagtctgtccaaggccttatcgacctcggtgctacc
gtcaacctgaagaacaaagaaaaacaatcacctcttcatttcgcagccaggtatggtcgt
ctgaattcgtgtaaacgactactcgatagtgcgataggacctcatatcttgaacgagagc
gacggtgcgggtcggacagcactccacatcgcatcgtggagcggtcatgttaaacttgta
caactcttactcagtaaaggagcattattgcatagggatcatgaaggaaggacacctctt
cacttggctgccgtagagggctacatcaatacaatgaaaggtttattagctacacatcct
catcttatgaatcaaacagacgatgaagggaacactgccttacacttggcggctcgagct
ggccaggctgccgtcgtcacattcctactcgacagtcaagccgcattgttacgtaataat
tcggaccagagctgcatggaagtggctatcgagtgcagaaacaaagatgtcgccatggcc
tttgtcatgaacgaaaggtggcatgaagcgatggacgattgtggggagaggaaggcacct
catatgctcggccttatcgaacagttaccagaagtggcttatactgttttagaaaggtgt
caaacagagaagaaagctgacgaagaagacccaagaagtcggcggaattacgactttacc
tatctccgatgtacaaaggataagcaatctaagtttctcaatagtgaagaaggatttgtt
ccccttctggtgttaaatacaatggtgaaattcaacagaatcaacttgttatcccaccca
gtgtgtgttaattatcttgcaatgaaatggaatgcctatggacgagcctgtcacgtgact
aacatcacgatctacctagtctttgttttcttcctaacctactttgtgtgtattaccgac
gtacctgatagcttccgggtcgccaaccgtacatcgtttgaagatagccagtcagttgaa
gaataccttcggttaccgtacgcagattttaccatgtcaactattgttgctgtatgggtg
atctgtgggtttgcttctatgaatatactgaaggaaatcgtccagctcttgcaacaggca
agtataaccggtaaagggagatacttctatgaattcaccaatctgctagaatggacgctc
tatgccacatcattagccttcgttgccccgtacctcgccggggagaacaaagatttccag
tggcagtgtggtgcaatcgcagttttcctagcctggtttaactttttactttatttacaa
agattcgatatatttggtatctacgtggtgatgttcctagaaattcttcgtacactagtc
caggttctattagtcttctcaatcctcatagttgcattcggtctcaccttccatatctta
ttaccaagagaggacaaccacgcgcataacaccccagcgatgtcactgctacgcgtttcc
accgcgctactcctcggcgaactcgacttcatcaattcgttcgtcgatccgctcaacgat
ggtgacaacgtcacaatgccttacccagaactcacatatttctttcttattggcctcgta
ttactgatgccaatcctacttatgaatctattgattggtttggctgttggtgatatcgcc
tccatgcaacataatgcccatctcaagcggctggctatgcaggttgaacttcatacagat
ctggagcagaagcttcctgctcgcatcctcaaggctggcgagagagaccaatacacagtg
tatacacataccgccaagtactttatactcagggcccgtgagagagggaaatacttcttc
tatattaagatgcttcagtacttcatatataggatttggaataaaatccgagaaacggct
ggtatggaaggcaacgcgattgggtccaaaatgggaggagatgcggcgaacgaccctcag
cttgttattctacaaaacgagatgattagccagaaaagaagactgaaagaggtcaaagag
cagctggaccgccaatacgacttgctacgtcttatcgtgcagaagatggagatccgaagc
gaggctgaggacagagacgaaggcgagggtcccggcggagagaacggcagatggttccct
tcctccaactattgcaccgacttctcgcagttcatgtcggcacgaagctccaggagatct
agtcttgctagtgttggggttggtacggtcgtcaggcaggacagcgcccccaccgttcca
accagatcatcaccatcatctgtgcgtgcttcctcgacttggagccttcctcggacgcgg
ttactatcatcatcagaatcaatgatatga
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