Lytechinus variegatus (green sea urchin): 121431309
Help
Entry
121431309 CDS
T11173
Name
(RefSeq) laminin subunit alpha-2-like
KO
K05637
laminin, alpha 1/2
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04512
ECM-receptor interaction
lvg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121431309
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121431309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
121431309
NCBI-ProteinID:
XP_041484754
LinkDB
All DBs
Position
17:20328879..20489823
Genome browser
AA seq
2434 aa
AA seq
DB search
MHLRFGKMGLKLEFVLLLCAAVTLCSGLSPPVEAQQGDDANAFNPRGNQRRFNDKEDCSS
EKPPHRRLYVHHSFLVFPITGLFPHIFNLATRGRISVNATCGDRGPETYCKLVEHVPNES
EDYPQCRVCNSRSFSKADRHPIWNAIDGTESWWQSPSIANGMQYHWVTITLDLGQIYQVA
YVIVKAANSPRPGNWILERSLDGEMYKPWQYFAISDSECVKEYGIVPSRDMHRFSRDDEV
TCTSLYSKLEPLENGEIHTSIVNGRPTAANPSQVLIEFTSARFIRLRLQQIRTLHADLMT
FNSRGIRYVDPIVSRRYYYSIKDISVGGQCICFGHAEQCILNAFAGPNDLALKCICEHNT
CGDQCNQCCRGFQQFPWRPGNADFGNSCRPCNCHGHADDCYYDNMVDAQSLSIDENGNYN
GGGVCVGCRDNTDGLNCQTCRDGFYRPLGVEPTDPSPCRACICSRVGTDPESNYNCVKDE
RSQSNMNPGDCFCKEGYAGPSCDRCARGYRGYPDCEKCECSDAGSSNVDPCEGPCECKPN
VEGSNCDTCKRGFFNLVGDNPDGCGQCYCFGITTECTSVPWGIEQVTTLSGWFVTNLERS
AYAFPDTTGTDMLAINHYKALEDLGNTGYYWFASTEYLGNKLPSHGGYLTFTVSYSIQRG
DIYQQPTRDADVVIEGDRLLLYQSFLYLQPEEERTARIQMAAGNWFVMTSDVDLSTGVMG
RRATSEEFMRVLADVRMLLIRASYNTRPRESRLKNVILEQVDRTAVSPAILASVEQCECP
PTYEGLSCESCEYGYRRVNNALYGGICERCDCNNHSPECDAYTGECSQCDHNTYGPHCEY
CLNGFYGDATSGQADACQPCACPLMEQGSSFSATCVADDRYGFVCDQCVTGHGGPRCEKC
VDGFYGDPMMTGMACKPCSLNCNSNLNTSSPDSCDTITGACLVCREGTAGDNCEKCALGY
YGDALQRTCQACQCHEAGSINPQCDEVSGSCQCRSNVTGRQCDTCSPGYFNLSSEGCQSC
DCHPTGSLDDICDVMTGQCRCKLGVSGRRCDQCLAGFWNLGENGCQSCECEQSGGLCDPL
TGQCGCPANVIGQRCDSCAPGTWGYNSMFGCKPCNCSDIGSSSQQCDLTTGECRCYKSYE
GRQCQSCGFGYYGYPKCRKCRCSRRGRDPSTCRGDLCDCNEDGSCVCKANIQGKKCSKCL
KGSFSLQPKLPTGCTSCFCFGITDKCSQADYISRRIDMIEEDASQLFVSDGNRLSTTQTG
VTHYSAGGGVNVTAARMALRTRDVYWNLPEIFLGNKVTAYGGMIKYKIDYTEPTSTDGWS
EARPYLPHIMLVGETQSLVIPVSNLNGKSRPKLELFEHNFLHQGTGIAPTREEFMMVLQD
LKSILLPASQTYQTLSSRISSVYMEVGGPRGNDSTSPTVLGIEQCKCPKGYRGTSCEECM
PGYVRVQEGPYLGRCELCTCHKHSDICNDGNGKCKDCQHNTTGSRCHLCAPGFYGDATRG
KSNDCQLCGCPLNILSNNFSPLCESASDGGYICTACPRGYSGRYCERCALGYYGNPFVPG
GSCLPCGCNEYGSNSTACNSTTGQCHCIPGVTGRSCDECSPRHVITGDGCTSCDDGCTGP
LLDALDEMRDDVDGLNTSRFIPPPWPILMRLTDERNQLQDQVDSYNRAVVAANELIASLP
NGTNDLSAQTRRLRRKLDRYTGGIELVARNASDVNLRARLLNEQVNATYKLINETVAMFK
DQFLNQGLLPARENAQLINRAMRILEELRDRSLIEMQVAAIEERRLARLSLNKTSNGYAE
MLQDLYAKIAQGKEDLNDFILKLDELLIRCRMADRTTTEAFEFIESANDSSNTLQNITDI
IREKKRQSEDDIQEAERLLLAAEDLLRMVNSSFQMSDADHMNLSVLLPDLVLRADQSDLD
LMELGEEADAATEHAIELHNRSALLENLLLPTQQHAQQSLEAERAYSDMVTAINEAHNAS
LQAKMMADKAYEKTYGNSSQSLGQQARELRDTGFSQLQQTSFLEINLQNLTSDLADLKGQ
IAEVNALQEKASQGIEEIKLALPSLEGDVTGDAQGSINSSARAVTLAKQAVDKSAGIIER
SAVLKEKLNGIGAKYQAYINATDDIANSVETSARIADEMGMKMDSMRKQALHIDRQRAPM
ELNLSQLRDKIRHARTEASRINVALLCRGDCARSYKPQASSTAFNALVLNINISSPNNMI
FYVGNNISGDYLAVETIEGQVRLSWDLGSGRGEVVHPSNLSANQDWYKVNIERFANTASL
RVEDSNQAKTSNGSTVTGFSPEGRNVLDVREDSNLFIGGIPSNFNIPVLSTRSFNGTLGD
VIFDDVTIGLWNFKTSEGPGEGSFRSPIATSTPEPGAYFDGTGYAKLRQPPLWDEYINSL
NFDIKTLSENGLLFYSSSEDQVRDWVIGWGKRWG
NT seq
7305 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttcgatttgggaagatgggattgaagttggagtttgttctgctcctctgtgcg
gctgtcaccctgtgcagcggtctgtcgcccccggtggaggcccagcaaggtgatgatgcg
aacgcattcaaccctcgcggtaatcagaggagatttaatgacaaagaagactgttcctcc
gaaaaaccccctcacagaagactgtatgtccatcacagtttccttgtttttcctatcaca
ggacttttccctcatatcttcaacttggccacaagagggcgaatatctgtgaatgcaaca
tgcggggaccgaggccctgagacatactgcaagctggtagagcatgtgcccaacgagtca
gaagactacccacaatgccgtgtgtgcaattctaggagcttttccaaagccgatcggcac
cctatatggaatgcaatagatgggactgagagttggtggcagagtccgagtatagcaaac
gggatgcaataccactgggttaccatcacgctagaccttggacagatttaccaagtagcg
tatgtaatcgtaaaagcagccaattcaccgcggcctgggaactggatcctggaacgctct
ttagacggggaaatgtacaagccctggcagtactttgctatttcagacagcgagtgcgtg
aaagagtatgggattgttccttcgcgggatatgcaccgcttctcgcgggatgatgaggtc
acgtgtacatcgttgtactccaaactggagcctctagagaacggcgagatacacacatca
atcgtcaatgggagacctactgctgcaaatccaagccaggttttaatagaatttacatca
gctcgtttcattagacttcgccttcaacagatccgaactttacacgccgaccttatgacc
tttaacagccgcggtatacgatacgtcgatcctatagtctcgaggaggtactattattca
atcaaggacatatcagtgggaggtcagtgtatatgttttggtcatgctgagcaatgtata
ttaaatgcttttgctggaccaaatgatctggcattgaaatgtatatgtgaacataacacc
tgcggtgatcagtgtaaccaatgctgcaggggttttcagcaatttccatggcgaccgggc
aacgccgactttggcaatagttgcagaccatgtaattgtcatggacatgccgatgactgt
tactacgataacatggtcgatgcccagagcctaagcatcgacgagaatgggaattacaat
ggaggaggagtttgtgtaggttgccgtgacaacacagatggactcaactgccagacatgc
cgagatggcttctaccgccctcttggggtcgagcctaccgatccttcaccatgtagagcg
tgcatatgcagccgtgttggtacagatccagagtctaactataactgtgtcaaggatgag
aggagccagagtaacatgaatccaggagactgcttctgtaaggagggttacgctggcccg
agctgtgacaggtgcgcccgtggataccgtgggtacccggactgtgagaagtgcgagtgc
agtgatgctggtagctctaacgtggacccttgtgaaggaccatgcgaatgcaagcccaat
gtagaaggatctaattgtgatacttgtaagagaggattcttcaaccttgttggtgataac
cctgatggctgtggacagtgctactgttttggtatcaccactgagtgtactagtgttcca
tggggaattgaacaggtaaccacactctctggttggtttgtgactaacctagaacgttca
gcctacgcattccctgataccaccggtactgacatgctagcaatcaaccattacaaggca
ttagaagacctgggcaatactggctactattggtttgcttccacggaatatctcggcaac
aagcttccatcccatggaggctacctaacattcacagtgagttatagcatacagagagga
gatatctaccaacaaccaaccagggatgcggatgtcgtcatagagggtgaccgtctcctg
ctataccagagcttcctgtacctgcagccggaagaagaacggacagcgaggatccagatg
gctgcggggaactggtttgtcatgacctcggacgttgacctctcaaccggggtcatgggt
cgaagggcgacctcggaagagttcatgagggtgctggctgatgtgaggatgctcctgata
agggcctcgtataacactaggccaagagaatcaaggttgaagaatgttattcttgagcaa
gttgataggacagcagtatcaccagcaatcctagccagtgtagagcagtgtgaatgtcca
ccaacatatgagggcctatcatgtgagtcttgtgaatatggctaccgacgtgtcaacaac
gccctctatggtgggatatgtgaaaggtgtgactgtaacaaccactcaccagaatgtgat
gcctacacgggagagtgctcacaatgtgatcacaacacatacggacctcattgtgaatat
tgtttaaatggtttctatggagatgcaacatccggtcaagctgatgcctgccaaccctgc
gcctgtccattaatggaacagggatcaagctttagtgccacctgtgtagctgatgatcga
tatgggtttgtgtgtgatcagtgtgttaccggccatggaggaccacggtgtgaaaaatgt
gttgatggtttctatggtgatccaatgatgacgggcatggcttgcaagccctgctctctg
aactgtaacagtaatctgaatacatcttcaccagacagctgtgataccatcaccggggca
tgtctcgtatgtagggaaggtactgctggagataactgcgagaagtgcgccctcggatat
tatggagacgcattgcaaaggacgtgccaagcttgccaatgtcacgaggcaggttccatc
aacccacagtgtgacgaggtcagcgggtcatgtcagtgcaggtcaaatgtcacaggtcgg
caatgtgacacctgttcgcctggatatttcaacctcagcagtgagggttgccaatcatgt
gactgccatcctaccggttcattggatgatatctgtgatgtcatgacaggacaatgccga
tgcaagctaggggtctctggccgacgctgtgaccagtgtctggcaggcttctggaattta
ggagaaaatggttgccagtcctgtgagtgtgaacagtccggtggtctttgtgatcctctg
acaggtcagtgtggttgtccagccaacgtcattggtcagcggtgcgactcctgtgcccct
gggacatggggatacaactccatgtttggttgtaagccatgcaactgcagtgatattgga
tcatcaagtcagcaatgtgatctgacaacaggagaatgcaggtgctataaaagctatgag
gggagacagtgccagtcctgcggattcggttactatggctaccctaagtgccgtaagtgt
cgctgcagccgtagaggacgggatccatctacgtgtaggggtgacctctgtgattgtaac
gaggatggtagctgtgtctgtaaggctaacatccaaggaaagaaatgcagcaagtgtttg
aagggtagcttcagtcttcagcccaagctacctacaggatgtaccagctgcttctgcttc
gggatcacagataaatgctctcaggctgactacatatcaaggaggattgatatgatagaa
gaagatgctagtcagctgtttgtgagtgatggtaacaggttgagtacaacacagactggt
gttactcactactcagctggtgggggtgttaacgtcactgcagcacgcatggctctcagg
accagagatgtgtactggaacctccccgagatatttcttggcaacaaggtcaccgcctat
ggaggaatgatcaaatacaagatagactacacagaaccaacgagcaccgatgggtggtct
gaagctagaccttatctacctcatatcatgcttgtaggagagacccaatctcttgtcatt
cctgtctcaaatctcaacggaaaatcaagaccaaaacttgagctctttgagcacaatttt
ctccaccaaggtaccggcattgctcctaccagggaagaattcatgatggttcttcaggat
cttaaatctattcttcttcctgcttctcagacctaccaaacactctcatctaggatatcc
agtgtctatatggaagtaggaggacccagaggcaatgattcaactagccctacagtacta
ggaatagagcaatgtaaatgccctaaaggatatcggggcacatcttgtgaggagtgtatg
ccaggctatgtgagggtacaagaagggccataccttggaagatgtgagctgtgcacctgt
cataaacactctgatatctgcaatgatggcaatggcaagtgcaaggattgccaacacaat
acaaccgggtcaagatgtcatctttgtgcacctggtttctatggcgatgctaccagagga
aagagcaatgattgtcagctgtgtggatgccctcttaatatattatctaacaatttcagc
cccttgtgtgagtctgcaagtgatggcggttacatatgtacagcttgccctcgtggttac
agtggcagatattgtgaaagatgtgctcttggttattatggcaacccttttgtcccagga
ggaagctgcctcccctgtggctgcaatgaatatggctcaaactctacagcgtgtaatagc
accactggacagtgccattgcattccgggggtgacaggacgtagctgtgatgagtgcagc
ccgaggcatgtgattacaggagatggatgtacttcttgtgacgatggttgtaccggtcct
ctacttgatgccttggatgagatgagagatgatgtggatggtctcaacacctcaagattt
atccctccaccatggccaatcctcatgcgacttacagatgagagaaatcaactccaggat
caggtggactcatataatcgagctgtggtcgctgccaatgaattgattgcttcactccca
aatggtaccaatgatcttagtgctcaaacaagaaggctgaggcgaaaacttgatagatac
acaggagggattgagttggttgcaaggaatgcctcggatgtcaacctcagagccagactc
ttaaatgaacaagtcaacgcaacatacaaactcattaatgaaacggttgcaatgttcaag
gaccagttcttaaaccaaggtcttttaccggccagagagaacgcgcagttgatcaacaga
gccatgagaatccttgaggaattaagggataggtctttaatagagatgcaggttgctgca
atagaagagagaagactagctagattgagtctcaacaagaccagtaatggctatgctgaa
atgcttcaagatctttacgcaaagatcgctcagggcaaggaggatctgaatgatttcatt
ctcaagctggatgaactacttatcaggtgcagaatggctgataggacgaccacagaggcc
tttgaattcattgaaagtgcaaatgattcttctaatacccttcagaacatcactgatata
atcagggagaagaagaggcagagtgaggatgatatccaggaagcagagcgtctcttactg
gctgctgaggatcttcttagaatggtcaacagcagcttccagatgtctgatgctgaccac
atgaatctgagtgtacttctacctgatcttgtacttcgagctgatcagagtgaccttgat
ctgatggagcttggtgaagaggcagatgctgcaacagaacatgctatagaactccacaat
agatcagcgctccttgaaaaccttcttctaccaactcagcaacatgctcaacagtctctt
gaagctgaaagggcatactctgacatggtgacggccatcaatgaggcccataatgcatca
ctgcaagccaagatgatggcagataaagcatatgaaaagacttatggtaacagttctcag
tcactcggccaacaagccagagagctcagagacactggtttcagtcaactccaacagact
tcattcctagagatcaaccttcagaatttgacctctgacctggctgacctgaaaggtcag
atagcagaggtcaatgctttgcaagagaaggcaagccaaggaatagaagagataaaacta
gctttgccctcactggaaggagatgtaacaggtgatgctcagggatccatcaacagttct
gcaagggcagtaaccctagcaaagcaggcagttgacaagtcagcggggatcatagagcga
tctgcagtactaaaggaaaagctgaatggtattggtgcaaagtaccaggcctatatcaat
gctactgatgacattgccaactcagtggagacatcagcaagaatagcagatgagatgggt
atgaagatggactcaatgcgcaaacaagctcttcatattgaccgacagagggcgccgatg
gaacttaaccttagccagcttagggacaagattagacatgctaggactgaagcatcaagg
atcaatgtcgctctgctttgccgaggggactgcgcacgcagctataaacctcaagcctca
agcaccgccttcaatgctttggtgctcaacatcaatatctcatctccaaacaacatgatc
ttctatgttggcaacaatattagtggtgactatcttgcagtggaaacgattgagggtcaa
gtgaggctaagctgggatttaggatcagggaggggtgaagttgtgcacccatccaatctc
tcagctaatcaagactggtataaagtcaatatagaaagatttgcgaacactgcctctctt
agagtggaagattccaaccaagccaaaacctccaatggtagcacagtgacagggttttca
ccagaaggtaggaatgttcttgatgttagggaagacagcaatctatttatcggtggcatc
ccatccaactttaacattcctgtgttgtcaaccaggtcatttaatgggaccttaggagat
gtcatatttgacgatgtcactatcggtctctggaacttcaagacctcagagggaccagga
gagggaagtttcagaagcccaattgcaacgagtactccagaaccaggagcctactttgac
ggcacaggctatgcaaagctccggcagccacccctctgggatgaatatatcaattcactt
aacttcgacatcaagaccttgtcggagaatggcttgctcttctatagttcatcagaagac
caggtgagggattgggtaataggatggggaaagagatggggatga
DBGET
integrated database retrieval system
