Lytechinus variegatus (green sea urchin): 121431646
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Entry
121431646 CDS
T11173
Name
(RefSeq) sphingosine-1-phosphate lyase 1-like
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg00600
Sphingolipid metabolism
lvg01100
Metabolic pathways
Module
lvg_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
121431646
Enzymes [BR:
lvg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
121431646
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Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
SepSecS
Motif
Other DBs
NCBI-GeneID:
121431646
NCBI-ProteinID:
XP_041485178
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Position
18:16931853..16975495
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AA seq
555 aa
AA seq
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MDIDSFFHSILEYGSSAGLVLAEALDDLDDALSEWPPILLVTITAFVVTVAMEMYAWYSE
SDLTLMQRGKRKFFKLLRSAPIIGSKIKEELKTTKNNIAKSSFKLPKGESYRTKLPEAGL
SQGEIMAILKKNYKSLEEIDWQEGKVSGTIYTGENYGIMGQIFELFCSSNLLQPGVFPGA
RKMEAEIVAMCCDIFKGGPDSCGTTTSGGTESILLACLAYREMAKERGVRKPEIILPDSG
HAAFEKAAHLFGMRIIRTPLNKTTYEADVKAMKRMINKNTCMLVVSGPSFPHGIIDPISE
VARLGVKYNIPVHIDMCMGGFLYPFLRLGGHDIPPADFSVAGITSISADLHKYGKAPKGS
SVVMYSEQKYRQGQFFVLTDWIGGIYASPTLAGTRSGAVIATAWAALMLQGFDGYIQHAD
RVIKTRESIEKRIREVEGIYVIGQPKVSAFTIASTVFDVFRLGTALTEKGWQMYTVQNPS
GLCMTVTDLLSKDTADQLVADVKECTAEIMKDPNAKAQGMAAIYGMAATLPDRSLVADFV
CGYLDAFYTTDNQQQ
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggacattgattcgttttttcattcgatcttagaatacgggtcttcagcaggtcttgta
ctagctgaagccctggatgatctcgatgatgcactctcagaatggccacccatcctcttg
gttaccataactgcatttgtcgtcactgttgccatggaaatgtatgcatggtattcagaa
tcagatctgactttaatgcagagaggaaagagaaagttcttcaagctgctcaggagtgca
ccgattattggaagcaagatcaaggaagaattaaagaccaccaagaataacattgccaaa
tcatccttcaaattacccaagggtgagagctataggactaagcttccagaggcggggctt
agtcaaggagaaataatggcaatactcaagaaaaactacaaaagcttagaggagatagat
tggcaggaaggcaaagtgtcggggacaatttacactggagaaaactatggcattatggga
cagatctttgagctcttctgtagctccaaccttcttcagcctggtgtcttccctggagct
aggaagatggaggccgagattgtggctatgtgctgtgatatcttcaaaggtggcccagac
tcatgcggtactaccacatctggaggaaccgaaagcatcttactagcgtgtttggcttac
agagagatggcgaaagaaagaggtgtgcgtaaaccagaaattattcttccagactctgga
catgctgcttttgagaaggctgcgcatctatttggaatgagaattataagaactcccttg
aataagaccacatatgaagctgatgtaaaggccatgaaacggatgataaacaagaatacc
tgtatgttggttgtctctggtccaagttttccacatggaatcatcgatcccatctcagaa
gtggccaggctcggtgtgaagtacaacatccccgttcacattgacatgtgcatgggtggg
ttcttgtacccgttcttgagactaggggggcatgacataccccctgcggatttcagcgtg
gcagggatcaccagtatatcagccgatttacacaagtatggcaaagcaccaaaaggaagc
tctgttgtcatgtacagtgaacagaagtatcgtcaaggacagttctttgtgttgactgac
tggattggaggaatctatgcttcccctaccctggcaggaactcgatctggtgcagtgata
gctacagcatgggcagctctaatgctccaaggctttgatggatatatccagcatgctgac
agggttatcaaaacaagagaatccattgagaaaagaattagagaggttgagggcatctat
gtgattggtcagcctaaagtaagtgcttttaccatagcatctactgtctttgacgtcttt
cgcctgggcactgccctgacagagaagggatggcaaatgtacactgttcaaaatccatca
ggtctatgtatgactgttactgatctactgagcaaggatacggctgatcagttggtagcc
gatgtcaaggaatgcactgcagagatcatgaaagaccccaatgccaaagcacaaggcatg
gcggcaatctatggcatggcggctactctgcccgatcggtctttggttgccgatttcgtt
tgtggatatcttgatgccttctatactacagacaaccagcaacagtga
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