Lytechinus variegatus (green sea urchin): 121431736
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Entry
121431736 CDS
T11173
Name
(RefSeq) tubulin alpha-3 chain-like
KO
K07374
tubulin alpha
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04145
Phagosome
lvg04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121431736
09142 Cell motility
04814 Motor proteins
121431736
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvg03019
]
121431736
03036 Chromosome and associated proteins [BR:
lvg03036
]
121431736
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lvg04812
]
121431736
04147 Exosome [BR:
lvg04147
]
121431736
Messenger RNA biogenesis [BR:
lvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121431736
Chromosome and associated proteins [BR:
lvg03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
121431736
Cytoskeleton proteins [BR:
lvg04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
121431736
Exosome [BR:
lvg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121431736
Exosomal proteins of other body fluids (saliva and urine)
121431736
Exosomal proteins of colorectal cancer cells
121431736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
121431736
NCBI-ProteinID:
XP_041485358
LinkDB
All DBs
Position
18:2037500..2044960
Genome browser
AA seq
450 aa
AA seq
DB search
MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFIDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDNCLD
RIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQIATA
VVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLFRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TIVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDSAEEQEEEEEEY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaatgtatctcagtccatgtcggccaagccggagtccaaatgggcaatgcctgc
tgggagctgtactgccttgagcacggcatccagcctgatggtcagatgccctcagacaag
accatcggaggtggtgatgactccttcaacaccttcttcagtgagactggagctggcaag
catgttcctcgggctgtcttcattgatcttgagcccactgtagtcgatgaggtccgcact
ggaacctaccgtcagttgttccatcctgagcagctgatcaccggcaaggaagacgctgct
aacaactatgctcgtggtcattacacagtcggcaaagaacagatcgacaattgcctggac
agaatcagaaaactggctgatcaatgcacaggtcttcagggttttctgatcttccacagc
ttcggtggcggcactggctcagggttctcctcccttctcatggagcgcctgtcggtagac
tacggtaagaaatccaaactggagtttgccatctacccagctcctcagattgctactgct
gtggtggagccttacaacgcaatcctcaccacccatacaacattggagcattccgactgc
gccttcatggtcgacaacgaggccatctatgacatctgccgtcgcaacctcgacatcgag
cgcccgacatacacgaacctgaaccgtctcatcggccagatcgtctcctccatcaccgct
tctctgcgctttgatggtgccctcaacgtcgatctgacagagttccagaccaacttggtg
ccctacccccgtatccatttccctcttgcgacctatgctccggttatttccgccgagaag
gcataccacgagcagctgagcgtggcagagatcactaacgcctgcttcgagcccgccaac
cagatggtgaagtgcgatcctcgtcatggcaagtacatggcgtgttgtctcctgttccgt
ggggatgttgtccctaaggatgtcaacgccgccatcgctaccatcaagaccaagcgcacc
atccagttcgttgactggtgtcccactggcttcaaggtcggcatcaactaccaaccacca
accattgtacccggaggcgatctggctaaggttcaacgtgctgtctgcatgttgagcaac
accacagccattgctgaagcctgggctcgtcttgaccataagtttgatctgatgtacgcc
aagcgtgctttcgtccattggtacgtcggagagggtatggaggaaggagagttctccgag
gctcgtgaagatttggcggcccttgagaaggactacgaggaggttggtgtagactccgct
gaagaacaagaagaggaggaagaggaatactaa
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