Lytechinus variegatus (green sea urchin): 121431788
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Entry
121431788 CDS
T11173
Name
(RefSeq) nucleolar RNA helicase 2-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lvg03009
]
121431788
03036 Chromosome and associated proteins [BR:
lvg03036
]
121431788
Enzymes [BR:
lvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121431788
Ribosome biogenesis [BR:
lvg03009
]
Eukaryotic type
Pre-60S particles
Helicases
121431788
Chromosome and associated proteins [BR:
lvg03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
121431788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
121431788
NCBI-ProteinID:
XP_041485423
LinkDB
All DBs
Position
18:4039614..4059638
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AA seq
741 aa
AA seq
DB search
MSQQLAESSMVNGDDILVNGEIRKKKKSKKEKKKTSDDVETSKEAEVLPKEESPSSAKKP
KKKRKKDSDEEGEDEKEKKKKRKKGSDEEGENESKKKKVKKEKSGENQQNGIKKAQPSSS
QSSVDEETQEQLGAFSNFGIGAHTIEKLKAKGINYLFPIQAKTFRPIADGFDVIAQARTG
TGKTLSFVLPLVEKWQHFPQKSGRQPIILALAPTRELAKQISEYFEKIGPHLSTTCIYGG
TAYWPQESAIRRGLDVVVGTPGRILDYIRKNTLDLSKLKHVVLDEVDRMLDMGFAESVEE
ILGAAYKTGESSDSEETPVNPQTLLFSATVPPWVYQTALKYMRKDVKKVDLVGRERVRTA
TTVQHLAINCSYFDRPEVISDVIKVYGGLDGRCMVFCETKKDANELAMSSAMKQETQVMH
GDIPQTQREVTLKGFREGKFQCLVTTDVAARGLDIPEVDLVIQCNPPRDVDSYIHRSGRT
GRAGRNGVCVCFYKRAEERDLQKVEYKAGIKFKRVSAPQPSDIIKSSVKDVTDFLDAVPA
DMIALFKGAAEDIIAEKGAVAALAAALAHITGSKAMKTRSLLTAEEGKTTFFLETQSQLL
DVGDVFRTLGRYIDRDARSAIKGIRLCADQTSAVFDVTDDQKDHLLSLWKDTPEAQLTVA
TELPEILAPAGSGSFDDRRGSGGGYYGGGRGGGYRRGGGGGGFRRGGGWGNRSGGGGGGR
GRGGGFGGRGRGGPGGGFTRR
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaacaattggcagaaagttccatggtgaatggtgatgatatacttgtaaatgga
gaaattcgtaagaagaagaaatccaagaaagaaaagaaaaagacatctgatgatgtagaa
acctctaaagaagcagaagtacttcccaaagaggaatccccatcatcagcaaagaagcca
aagaagaagaggaagaaggattccgatgaagaaggagaggatgaaaaagaaaagaagaag
aaaaggaagaagggttctgatgaggaaggagaaaatgaaagtaagaagaagaaagtgaag
aaggagaagagcggagaaaatcagcagaatggcatcaagaaagcacagccatcatccagt
cagtcatccgtagatgaggagacccaagaacagttgggagccttctcaaactttggtatt
ggagctcataccatagagaaactgaaagccaaaggaatcaactacttatttcccatccaa
gcaaaaacgttcaggccgatcgctgatggatttgatgtcatagcccaagcacgaactgga
acgggtaagacattgtcctttgtcttgcctctggtggaaaagtggcagcactttcctcag
aagagtggccggcagcccatcatccttgccttggctcctaccagagaacttgctaaacag
atttctgagtactttgaaaagatcggtccacatctcagcaccacgtgcatctacgggggc
accgcctattggccgcaggagtccgccatccggcgtggtctggacgttgtcgtgggaacg
cctggacgtatcttggattacatccgtaagaacacccttgacctgtccaagctgaagcat
gttgtactggacgaagtggatcggatgctggatatggggtttgcggaatcggtggaggag
attcttggcgctgcctacaagacaggtgaatcaagtgattctgaggaaacccctgtgaat
ccgcagacactcctcttctctgctacggttcctccctgggtctaccagacagcattgaaa
tacatgcgcaaggatgtcaagaaggtggatcttgtgggtagggagagggtcaggacagcc
acaacagttcagcatttggccatcaactgtagctactttgaccgacccgaggtcatcagc
gatgtcatcaaggtctacggaggcctggacggccgctgcatggtcttctgcgagaccaag
aaggatgctaacgagctggccatgagctctgctatgaagcaggagacgcaggtcatgcac
ggggatatcccccagacacagcgagaggttacactgaagggtttccgagagggtaaattc
caatgcctggtcaccactgacgtagcagcgagaggattggacatccctgaagttgatctg
gtcatccagtgtaacccacctagggatgttgattcttacatccatcgatccgggaggact
gggagagctggtcgtaatggagtctgtgtctgtttctataagagagcagaagagagagat
ctacagaaagtggaatacaaagcaggcatcaagttcaaacgagtttctgctcctcaacct
agtgacatcatcaagtcctccgtcaaagatgttacagattttctggatgctgtacctgct
gatatgattgcattgttcaagggtgcagcggaggatatcatcgccgagaagggagcggtg
gcagcccttgccgcagctctggctcacattacaggctcgaaagccatgaagacgagatca
ctactcacagcagaagagggcaagaccacattcttcctggagactcagtcacagctcctg
gacgttggggatgtcttccggacccttggacgctacattgaccgtgacgcgagaagtgcc
atcaaaggcatccgtctgtgtgctgatcagacctcggccgtctttgatgtgactgatgat
cagaaggaccatttactgtctctatggaaggacacgcccgaagctcaactcactgtcgca
acggagctcccagaaatacttgccccggctgggtcaggttccttcgacgaccggagaggc
agcggaggcggttactacggagggggaagaggaggtggttataggagaggtggaggtggt
ggtggcttcaggagaggaggagggtggggtaataggagtggaggcggcggtggtggaaga
ggtcgaggaggtgggtttggtggtcgtggaaggggagggccgggcggaggcttcactagg
aggtaa
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