Lytechinus variegatus (green sea urchin): 121432010
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Entry
121432010 CDS
T11173
Name
(RefSeq) PDZ and LIM domain protein 3-like isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121432010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lvg04990
]
121432010
Domain-containing proteins not elsewhere classified [BR:
lvg04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
121432010
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
121432010
NCBI-ProteinID:
XP_041485755
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All DBs
Position
18:complement(14112017..14126519)
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AA seq
341 aa
AA seq
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MTELIDFTLPGPAPWGFRLAGGKDFNTPVHISKTTPNGKAAYAGLEQKDVVCAINGNITS
GMTHFDAQDAIKEVTGDLKLRVRRGGGYVDAPTQSKAGMTFQSAPAPVRRMEPEVLPPAG
PQIVHKQFNSPVGLYSADNIADAFKGQVEGMGIDAGATKFPAPSPMSPMSPMSPMSPGFG
GQSYGGQQRQGFGSSSTPFGSSAHEATYSRPRPMAQVYSGQAPRAQSYAPPRRPPPIVNR
PKAQRGPPPSQQKPQRAFAPNPSPKSRSFRMLEEMTQEEEARALEEMQMANKAEEQSEFT
HRPRPIDDYEPYDGTPRGKQSRSFKMLQQLTAEEEAMIEDL
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaattgatagattttaccctccccgggcctgccccatgggggtttcggctagct
ggcggcaaggattttaatacaccagtgcacatatcaaagacaacaccaaatggaaaggca
gcttacgcagggttggaacagaaagatgtggtgtgcgccatcaacggtaacattacctca
ggtatgacccactttgacgcccaggatgccattaaggaagtcaccggggacctcaaactt
agagtcagaagaggaggaggatatgtagacgccccgacacaatcgaaggcaggaatgacc
ttccaatcggccccagctccagtccgacgcatggaacctgaagttcttccaccagccggt
cctcaaatcgtccacaagcagttcaactcccctgtgggtctctattctgcagataacatc
gccgatgccttcaagggccaagtcgaaggaatgggaatcgatgccggtgccaccaagttt
cctgcgccttctccgatgtcaccaatgtcccctatgtctcctatgtcaccaggcttcgga
ggacaaagctatgggggacagcagagacaaggcttcgggtccagttcaacacctttcggt
tcctcagcccatgaagccacgtactcaagacccagacccatggcccaggtgtattcgggc
caggccccaagggcccagtcatacgcacctccgaggcgcccaccaccaatcgtcaaccgt
cccaaagcccagcgtgggcccccaccttcccagcagaagccgcagagggcgtttgcgccg
aacccaagtcccaaatcaaggtcgttccggatgcttgaggagatgacacaagaagaagaa
gccagagccttggaggagatgcaaatggccaacaaagccgaggagcaatcagagttcacc
caccgaccacgcccaatagacgactacgagccctacgacggaacgccacgtggtaaacaa
tccagatctttcaaaatgctacaacagttgacggctgaagaagaggctatgattgaagac
ttgtaa
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