Lytechinus variegatus (green sea urchin): 121432254
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Entry
121432254 CDS
T11173
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1-like
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
lvg01100
Metabolic pathways
Module
lvg_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
121432254
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lvg01003
]
121432254
Enzymes [BR:
lvg01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
121432254
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
121432254
Glycosyltransferases [BR:
lvg01003
]
Glycan extension
O-Glycan
121432254
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GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
FAM184
TMF_DNA_bd
ADIP
DUF5618
DLP_helical
Motif
Other DBs
NCBI-GeneID:
121432254
NCBI-ProteinID:
XP_041486044
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Position
18:complement(23342702..23391379)
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AA seq
537 aa
AA seq
DB search
MIFRTPSIRSLIKIGLMLCIGFLLLLAKLETCTNTITDGRLAVRDLLAQAQPFANNGEMD
RKEDCMVALSEQEERHRTEIAALKQQILDLKTELTKYVENIQQLEEPMAGGEAAATARLA
KYFDREHGRELLDHMQKQMGKIERHRPLRDEYDVVPFSSLTSKLVYSMEQGLSKRPSQRP
KGDRKEELVEAVYFAIDELNKKKETSTDFSIDNFVDGIYRTDRTVGTYYNLVFRGMHENY
YYSMQLLRPFAPIQKYKSQIVDTSRIVINIIMPLSGRIEKFRTFMERFQTVVLETKIHVF
LTIVYFGNDGLTEIHKILGDITEPFRFHNYKIITLSGEFSRGRGLEEGVRSWDGPDVLMF
FCDVDIAFNREFLEHCRYYTIAGRTVYYPMVFSLYNPEIVYSTREQIPNESDMFHIHKDS
GFWRDFGFGMTCQYRSDFMNIKGFDVDMKGWGGEDVYLYKKYLQSEMKVIRVPDAGIFHT
YHPKECSENLTAEQYHMCIGSKARSEASHSQLGRLAFKDDINMTLYLMGDPKHHPPH
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgatcttccgtaccccttcaatccgatccttgatcaagattggtttgatgctctgtatt
ggattcctactactccttgccaagctagaaacatgcaccaacaccatcaccgatggccgt
ctggccgtcagagacctcctggcccaggctcaaccgttcgcaaacaacggcgagatggac
cgcaaagaggattgcatggtcgctctcagcgagcaggaagagcgtcaccggacggagatt
gcggccctgaagcagcagattcttgatctgaagactgaactgaccaaatatgtggagaac
attcaacagttggaggaacctatggctggtggagaggcggctgcaaccgctcgacttgcc
aagtactttgatcgcgagcacggtcgagagctccttgaccacatgcagaagcagatgggt
aagatagagcgccaccgcccgcttcgggacgagtacgatgtagtgcctttcagtagtttg
acgtctaagctcgtctatagcatggagcaagggctttccaaaaggccatctcaacgtcca
aagggtgaccgcaaagaagaattagtagaagctgtgtattttgccattgatgaactaaat
aagaagaaagaaacatctacagatttctccattgacaactttgttgatggtatatacagg
acagataggactgtgggaacctattataatcttgtttttcgtggtatgcatgagaactat
tattacagcatgcagcttctacgaccctttgcacccatacaaaagtataaatcacaaata
gtagacactagccgtatagttatcaatattatcatgcctttatcggggagaatagagaag
tttaggacattcatggagcgtttccagacggtggttttagaaactaagatccacgtcttc
ctgactatagtgtactttgggaacgacggtttgacagaaattcataagattcttggagac
attacagaaccgttcaggttccataattataagataattacactgtcaggagagttctca
agaggtcgtggattagaagaaggtgtccggagctgggatggtccggatgtcctgatgttc
ttctgtgatgtggacatcgctttcaaccgggagttccttgagcactgtcgctactacacc
atcgcaggacgtactgtctattaccccatggtgtttagtctgtacaatccagagatcgtc
tactccacccgtgaacagattcctaatgaaagcgatatgttccacatacacaaggattct
ggattctggagggactttggcttcgggatgacctgtcagtatcgctcagacttcatgaac
atcaaaggttttgatgttgacatgaagggatggggtggagaggatgtgtatctttacaag
aagtatctccagtcagagatgaaagttataagggtacctgacgcaggtattttccacacc
tatcatccaaaggaatgctctgagaacctgacagcagaacagtatcatatgtgcatcggg
tcaaaggctcgcagtgaagcctcccactctcagcttggtagattagctttcaaagacgat
atcaacatgacactgtatttaatgggcgatccaaagcatcatcctccacattga
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