Lytechinus variegatus (green sea urchin): 446185
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Entry
446185 CDS
T11173
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
lvg Lytechinus variegatus (green sea urchin)
Pathway
lvg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lvg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
446185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lvg03000
]
446185
03021 Transcription machinery [BR:
lvg03021
]
446185
Transcription factors [BR:
lvg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
446185
Transcription machinery [BR:
lvg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
446185
RNA polymerase III system
TFIIIB
446185
RNA polymerase I system
SL1/TIF-1B
446185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
446185
NCBI-ProteinID:
XP_041469704
LinkDB
All DBs
Position
7:42227707..42240567
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AA seq
271 aa
AA seq
DB search
MYNPSQQQHGQIVPVSVHKNQQENQDEGQQRSHYPQISSQQSQSYLSVPSIGTPSFGSVG
SVTSLAPGSSFIPPSPMAPLTPATPASSESSGIVPQLQNIVSTVNLSCKLELKKIALHAR
NAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEDDSRLAARKYARVVQKLGFAA
KFLDFKIQNMVGSCDVKFPIRLEGLVLTHGQFSSYEPELFPGLIYRMVKPRIVLLIFVSG
KVVLTGAKVRQEIYDAFNNIYPILKSFKKTT
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgtacaatcctagtcagcaacaacatggacaaattgttcctgtgtccgttcacaaaaac
cagcaggaaaatcaggatgaagggcagcagaggagtcattatccccagataagttcccaa
cagagtcagtcctatctttctgttccatccattggtacaccttcttttggttcagttggt
agtgtgacatcacttgcaccaggtagcagctttattcctccttccccgatggctccctta
acacctgctacaccagcgagcagtgaatcttcgggtattgttccacaactacagaatatt
gtgtcaactgtaaatctgagttgcaagttggaactcaagaaaattgcactacatgcaaga
aatgctgaatacaacccaaagagatttgctgcagtgatcatgagaatacgtgagccaaga
accacagctctcatctttagttcaggaaagatggtttgtacaggtgctaagagtgaggat
gactctagattggctgccaggaaatatgcaagagttgtacagaagttgggattcgctgca
aagttcttggatttcaaaatccagaacatggttggtagttgtgatgttaagtttccaatt
cgtctggaaggattggtactaacacatggacagttctctagctatgaaccagagctattt
ccaggtctgatttacagaatggtgaaaccacgcattgtactcctcatctttgtttctgga
aaagtggttttaacaggtgctaaagtgaggcaggagatctatgatgccttcaataacatc
taccctattctgaaatccttcaaaaagactacttag
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