Leucobacter viscericola: G7068_02865
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Entry
G7068_02865 CDS
T07181
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lvi
Leucobacter viscericola
Pathway
lvi03420
Nucleotide excision repair
lvi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G7068_02865
03430 Mismatch repair
G7068_02865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lvi03400
]
G7068_02865
Enzymes [BR:
lvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G7068_02865
DNA repair and recombination proteins [BR:
lvi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G7068_02865
MMR (mismatch excision repair)
Other MMR factors
G7068_02865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
AAA_30
UvrD_C_2
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
QIK62259
UniProt:
A0A6G7XCT8
LinkDB
All DBs
Position
complement(605168..608602)
Genome browser
AA seq
1144 aa
AA seq
DB search
MSSTTLKSQPPVFSATRIAEILTVPPATPLTPTAEQRTVIEHPLGASTLVVAGAGSGKTE
TMANRVVWLVANGLVAPDQVLGLTFTRKAAGELRERISLRLALFAARLQEHAELGQLGDT
EATHAARLTELLADGLELPEVSTYNAFAAGVLQEFGIAAGVAPGAVIIDEATAWRIARET
ILQSTDSALVQSELRLPQIVNYVLNLDHAVADNLTSFDRVDQIVSEFARVLELPYSEKEL
GGERSGKVYAPVRDAVAALKETPLITRLAREFAEEKQRRGVLEFSDQLALATRAIERSRD
AIPLLRQRHRVILLDEVQDTSVGQTRFLSRIFAGHSVMAVGDPHQSIYGWRGASAEGLQS
FHADFRGRGETRTPPATLTLSTSWRNPGRVLDVANTIAAPLAAEAAVAVPKLAPRPGASE
GGVEWVFPETVHEERYAVATWMRDAREAHLSANDELPSAAVIFRKRSAMAGFAAALTELG
VPNRIVGLGGLLSTPEVTDVVSVLRCLWYADANSELIRLLSGPRFRLGAADIAGLSKAAR
WFASRDVAQQPLSPESLAADSVLPDPDREFTLVDALDQVATMRDLSHVALKHVSPVGRER
LREAGRMLAALRQGVGGNISELINSTVQALRLDIELAANEARQYLAAADAYANLDVFTEL
VEGYLAIDTRGTLASLLEWIERATTADETAEHVAAPTPGTVHLITAHGSKGLEWDLVAVP
RLVAGEFPGQARAGAGWLRTGEIPDELRGDAAARPELNWRISETQQELRDRIADYREALK
DRHAEEERRLAYVAVTRSAGRLLLSGSFWGGQTKARPPSHFLTELDDEGLLGENALGKRL
PRESEHESDPSELAEMTLQWPLDPLGARADGVMRAADTVRDAIASWDGDTREVDEVVQLL
LAERQASLQEANGPSASAKLPDRITASTFHEFVEDSTTAERRRLRPVPQRPYRRTRIGNR
FHEWVERRATTALGTALPLACFEEADFAELDTEAELQPLIEQFERSRWAQLRPIAVEQEV
TLPFAGRSLVCKLDAVYLLESEGSADAGQARYEVVDWKAGKSPRNDEERRNRFFQLDLYR
HAYAQWAHVDPELIDVSLFYVAEGVELRGEAPRSLDELEQIWLEAADKLSAESNQKTREG
HPRR
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
gtgagtagcacgacattgaagtcacagcccccggtgttttctgcgacccgcatagcggag
attctcacggttcctcccgcgacgccgctgaccccgacggctgaacagcgcacagtcatc
gagcatcctctcggtgccagcacgcttgttgttgccggggctggcagcggaaaaaccgag
accatggcaaaccgcgtggtgtggcttgttgcaaacggattggtcgcgccagatcaggtg
ctcggtcttacctttacccggaaggccgctggcgagctgcgtgagcgcatatctttgcgg
ctcgcgctctttgcggctcggctacaggagcacgctgagctcgggcagctgggtgacacc
gaggcaactcacgcggcgaggctgacagagttgctcgcagacgggcttgagctgcccgaa
gtgagcacctacaacgcatttgcggcgggggtgctgcaggagtttgggatcgcggccggg
gttgctcccggggccgtgattattgatgaggcgacggcctggcgcattgcgcgtgaaacc
atacttcaaagcaccgacagcgcacttgtgcagagcgaattgcgattgccccagatcgtg
aactacgtgctcaaccttgaccacgctgttgccgacaacctcacctcgtttgaccgcgtt
gaccaaatcgtctcagaatttgcgcgggtactcgagctgccctactccgaaaaggaactg
gggggagagcgcagcggcaaggtctacgcacccgtgagggacgccgttgcggcgttgaag
gagacacccctcatcacgcgtctcgcgcgcgagttcgctgaagagaaacagcgtcgcggg
gtgctcgaattctcagaccagttggcgttggccacacgggcgatcgagaggtctcgcgac
gcgatcccgcttctgcggcagcggcaccgtgtgattctgctcgacgaggtgcaggacacc
tcggttgggcagacccgattcctctcccgcatttttgcgggccactcagtgatggcggtc
ggcgatccacaccagtccatctacggctggcgaggcgcatcggctgagggcctgcagtca
ttccacgctgactttcggggcagaggagaaacgcgcacgccaccggcgacgctgactctc
tcgacaagctggagaaacccgggcagggttctcgacgttgcgaacaccattgcggctccg
ctggccgccgaggcggccgtggccgttccaaaacttgcaccccgaccgggtgcgagtgag
ggaggcgtcgagtgggtctttcccgagaccgtgcatgaagagagatacgccgttgcgacc
tggatgcgggatgcccgcgaggcgcatctctcggccaacgacgaattgccgagcgcagcc
gtgatctttcgcaagcgcagcgcaatggctggattcgccgctgctctgacagagcttggc
gtgccaaacagaatcgtcggtttgggtggcctgctctcgacacccgaggtgactgacgtc
gtgagtgtgctgcgctgcctttggtatgcagacgccaactccgaacttatccggctgctt
tcggggccgagatttaggcttggcgcggccgacattgccgggctcagcaaggccgcgcgt
tggtttgcatctcgcgatgtggctcagcagcccctgagccccgaaagtcttgctgctgac
agtgtgctgccggatcccgaccgcgagttcaccctggttgacgcgctcgaccaggtcgcc
acaatgcgcgacctcagccacgttgctctgaaacacgtcagcccggtggggcgtgaacga
ctccgcgaggccggacgcatgctggcggcgcttcggcagggcgttggcggcaacatcagc
gaactcattaactcgacggtgcaggcgctgcgactcgacatcgagctcgccgcgaacgag
gcccggcagtacctggcggcggccgacgcgtacgccaaccttgacgtgttcacggagctt
gtcgaggggtatctggcgatcgacacccgaggcacactcgcctcgctgctggaatggatc
gagcgcgcaacaaccgccgacgaaaccgcggagcatgttgccgccccgactcccggcacg
gtccatttgatcaccgcacacggctccaaaggccttgagtgggatctggtcgcggtgccg
cgtctggtagcaggggagtttcctgggcaggcccgcgcaggcgcggggtggctgcgcacg
ggcgagattcctgacgagctccgcggtgatgccgcggccaggcccgaactgaattggcga
atttcggagacccagcaggagcttcgcgacaggatcgctgactaccgcgaggctctgaaa
gatcggcacgccgaagaggagcgccgccttgcctatgtcgcggtgactcgctcagctggc
cggctgctgctgagcggctcgttctggggagggcagaccaaggccaggccaccgtcgcac
ttcttgaccgaacttgatgacgaagggttgcttggagaaaacgccctcggaaaacgtctg
ccgcgcgagagcgaacacgagagcgaccccagcgaactcgcggagatgaccctgcagtgg
ccgctggaccctctgggtgctcgtgcggatggagtgatgcgggccgcggataccgtgcgg
gacgccattgcgagctgggacggtgacacccgcgaggtcgatgaggttgtgcagctgttg
ctcgccgagcgtcaggcttccctgcaagaggcaaacggcccatcagcgtcggccaaactt
cccgatcgaattaccgcctccacgttccatgagtttgtcgaggactcgaccacggctgaa
cggcgacgcctccgtcccgttccgcagcgaccttaccgtcgcactcgaatcggcaatcgt
tttcacgagtgggtggagcggcgcgcaacaaccgctctcggcaccgcgcttccacttgcc
tgttttgaagaggcggacttcgcggagctcgataccgaggccgagctgcaacccctcatt
gagcaattcgagcgctcccggtgggcgcaactgcggccgatcgcggtagagcaagaggtc
acgctaccgtttgcggggcgcagcctcgtgtgcaaacttgacgcggtgtatctgctggag
agtgagggctcagctgatgccgggcaagctcgctacgaagttgtcgactggaaggctggc
aagtcgccgcgcaacgacgaggagcggcgaaaccggttcttccagcttgacctctaccgg
cacgcgtacgcccagtgggcgcacgttgatcccgaactcattgatgtctcactgttttac
gttgccgagggagtggaacttcgtggtgaggcgccacgaagcctcgacgaactggaacag
atttggttagaagccgctgacaaactcagcgcggagtcgaaccagaagactcgggaaggt
catcctcgtcgatag
DBGET
integrated database retrieval system
