Leucobacter viscericola: G7068_03880
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Entry
G7068_03880 CDS
T07181
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lvi
Leucobacter viscericola
Pathway
lvi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lvi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G7068_03880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvi03019
]
G7068_03880
03016 Transfer RNA biogenesis [BR:
lvi03016
]
G7068_03880
Enzymes [BR:
lvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
G7068_03880
Messenger RNA biogenesis [BR:
lvi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
G7068_03880
Transfer RNA biogenesis [BR:
lvi03016
]
Prokaryotic type
tRNA degradation factors
G7068_03880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KhpA-B_KH
Motif
Other DBs
NCBI-ProteinID:
QIK62446
UniProt:
A0A6G7XD98
LinkDB
All DBs
Position
complement(802042..804300)
Genome browser
AA seq
752 aa
AA seq
DB search
MEGPEIKFAEAVLDNGKFGKRTIRFETGRLAQQAQGAVAAYLDEETMLLSATSASKNPKD
HFDFFPLTVDVEERSYAAGKIPGSFFRREGRPSTEAILVCRLIDRPLRPSFVDGLRNEVQ
IVVTVLSIAPGEFYDALAINAASASTQISGLPFSGPIAGVRLALIGDQWVAFPNEAQLAD
AVFDLMVAGRVIVDKNGKEDVAIMMVEAEATEDSWNLIKAGATKPDEAVVAQGLEAAKPF
LSQLVKAQEQLAAQSAKEIQEYPVFLPYTDEVYAAVAELAEAELAGIYQIADKQERQDAD
DALKARVKEAIVAKVEAGALDASAEGQVSGAYKSVTKKIVRGRILAEGARIDGRGLRDIR
ALDAEVQVIPRVHGSAIFQRGETQIMGVTTLNMLKMEQQIDSLSPTTSKRYMHHYNFPPY
STGETGRVGSPKRREIGHGFLAERALVPVLPARDEFPYAIRQVSEALSSNGSTSMGSVCA
STLSLLNAGVPLRAAVAGIAMGLVSDQVDGETRYATLTDILGAEDALGDMDFKVAGTSEF
ITALQLDTKLDGIPSDVLAGALTQAKEARTTILGVLNQAIDTPDEMAPTAPRVISVKIPV
DKIGELIGPKGKTINGIQDTTGADISIDDDGTVYIGAVDGPSAEAARAQVNAIANPQNPE
VGEQYLGTVVKNAAFGAFVSLLPGKDGLLHISEVRKLAGGKRIDSVDDVLSIGQKILVKI
TKVDDRGKLSLEPVLEEGAAEAEAAPAEAAAE
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
gtggagggtcctgaaatcaagtttgcggaggccgtgctcgataacggcaagttcggcaag
cgcaccatccgttttgaaaccggccgtctcgcgcagcaggcacagggtgccgtcgccgcg
tacctcgacgaagagaccatgcttctctcggccaccagcgcatcaaagaacccgaaggat
cacttcgacttcttcccgctgaccgtcgatgttgaagagcgctcgtacgccgcgggcaag
atccccggctcgttcttccgtcgtgagggacgcccctcgaccgaggcgatcctggtttgc
cgtctcatcgaccgcccgctgcgcccgtcgttcgttgacggtctccgcaacgaggtccag
atcgttgtcaccgtgctctcaatcgcgccgggtgagttctacgatgctctcgcgatcaac
gcggcgagcgcctcgacccagatctcgggtctgccgttctcaggccccattgctggtgtg
cgcctcgcgctcatcggcgaccagtgggttgcgttcccgaacgaggcacagcttgctgac
gccgtcttcgacctgatggttgccggtcgtgtgatcgttgacaagaacggcaaggaagac
gtcgcgatcatgatggtcgaggctgaggccactgaggattcttggaacctcatcaaggct
ggcgccacgaagcccgacgaggcagttgttgcgcagggtcttgaggccgcaaagccgttc
ctgtcgcagctcgtgaaggctcaggagcagctcgccgcacagtcggcgaaggagatccag
gagtatccggtcttcctgccctacaccgacgaggtctacgccgctgtcgctgagctcgca
gaggctgagctcgctggcatctaccagatcgctgacaagcaggagcgtcaggacgctgat
gacgcactgaaggctcgcgtcaaggaagccatcgtggccaaggttgaggcaggcgcactt
gacgcttccgccgagggccaggtttcgggcgcgtacaagtccgtcaccaagaagatcgtt
cgcggccggatcctcgcagagggtgcgcgcatcgacggtcgtggtctgcgcgacattcgt
gcactcgacgccgaggttcaggtcatcccgcgcgtgcacggttccgcgatcttccagcgc
ggcgagacccagatcatgggtgtcaccacactgaacatgctgaagatggagcagcagatc
gactcgctgtcgcccacgaccagcaagcgttacatgcatcactacaacttcccgccatac
tcgaccggtgagaccggccgcgttggcagcccgaagcgccgcgagattggccacggcttc
ctcgcggagcgcgcgttggttccggttctgccggcccgcgacgagttcccctacgcaatc
cgccaggtatctgaggcgctgagctcaaacggctcgacctcgatgggctccgtctgcgct
tcgacgctgtcgctgctcaacgccggtgtgccgctgcgcgccgccgttgctggcatcgcg
atgggtcttgtcagcgaccaggttgacggcgagacgcgctacgcgaccctcaccgacatc
ctcggtgcagaggacgcactcggcgatatggacttcaaggtcgcaggtacctcggagttc
atcactgcactgcagctcgacaccaagctcgacggcatcccgtcagacgtgctcgctggc
gcactgacgcaggccaaggaagcacgcaccacgatcctgggtgtgctcaaccaggcaatc
gacacgcccgacgagatggcgcccaccgcgcctcgcgttatcagcgtgaagattcccgtc
gacaagatcggcgagctgatcgggcccaagggcaagacgatcaacggtatccaggacacc
actggtgccgacatctcgatcgacgacgacggcaccgtgtacatcggtgcggttgacggt
ccgtcggctgaggccgctcgcgcgcaggtcaacgcgatcgcgaacccgcagaaccccgag
gtcggcgagcagtacctcggtaccgtcgtgaagaacgccgcctttggcgcgttcgtctcg
ctgcttcccggcaaggatggcctgctgcacatctctgaggtgcgcaagctcgccggtggc
aagcgaatcgacagcgttgatgacgtgctctcgatcggtcagaagatcctcgtgaagatc
acgaaggttgacgatcgtggcaagctctcactcgagcccgtgctcgaggaaggcgctgct
gaggcagaggcagctcctgccgaggccgctgcagagtaa
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