Leucobacter viscericola: G7068_15485
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Entry
G7068_15485 CDS
T07181
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lvi
Leucobacter viscericola
Pathway
lvi03030
DNA replication
lvi03430
Mismatch repair
lvi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lvi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G7068_15485 (dnaE)
03430 Mismatch repair
G7068_15485 (dnaE)
03440 Homologous recombination
G7068_15485 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lvi03032
]
G7068_15485 (dnaE)
03400 DNA repair and recombination proteins [BR:
lvi03400
]
G7068_15485 (dnaE)
Enzymes [BR:
lvi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G7068_15485 (dnaE)
DNA replication proteins [BR:
lvi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G7068_15485 (dnaE)
DNA repair and recombination proteins [BR:
lvi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G7068_15485 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
MCM10_OB
Motif
Other DBs
NCBI-ProteinID:
QIK64453
UniProt:
A0A6G7XIS6
LinkDB
All DBs
Position
3558469..3562029
Genome browser
AA seq
1186 aa
AA seq
DB search
MAENDGFVHLHVHSEYSMLDGAARVKPLIQAAAEQNMPAIAVTDHGNTFGAFDFWKTAND
AGVKPIVGIEAYVTPGTHRSDRTRVRWGDGAGDDVSGAGAYTHMTLLSQNTEGMHNLFRL
SSLASIEGYYFKPRMDRELLQKYHNGLIATTGCPSGEIQTRIRLGQLKEAREAAAEFQDL
FGKENFFCELMDHGLDIERRVKKDLIEIARDLKIPLVATNDLHYVHETDAEAHSALLCVQ
SGSRMDDPNRFQFSGSGYYLKSAAEMRHVFRELPEACDNTLLIAERCGSEFNTSANYMPR
YPVPDGETEESWFIKEVERGLHYRYPGGIPDAVRKQAEYETGVITQMGFPGYFLVVADFI
NWSKDNGIRVGPGRGSGAGSMAAYAMRITDLDPLQHGLIFERFLNPDRVSMPDFDVDFDD
RRRGEVINYVTEKYGDARVAQIVTYGTIKSKQALKDSSRVLGFPFGMGEKLTKAMPPAVM
AKDIPLSGITDPAHPRYKEAAEFRTVLAEDAEAKSVYETALGLEGLKRQWGVHAAGVIMS
SDPLIDIIPIMKREQDGQIVTQFDYPTCEGLGLIKMDFLGLRNLTIISDALENIRLNRGE
VLDLERLELDDAPSYELLARGDTLGVFQLDGGPMRGLLRLMKPDNFEDISAVLALYRPGP
MGADSHTNYALRKNGLQPITPIHPELEEPLREILDTTYGLIIYQEQVMSIAQKVAGFSLG
QADILRRAMGKKKKEELDKQYEGFSGGMKANGFGEAAIKALWDILLPFSDYAFNKAHSAA
YGVISYWTAYLKEHYPAEYMAALLTSVGDSKDKLAIYLNECRRMGIKVLPPAVNESFADF
AAVGDDIRFGLGAIRNVGANVVEGIRGAREAQGAFESFHDFLKKVPLVALNKRTVESLVK
AGAFDGLGGTRRALVEIHEPAIESAVKDKRDAEKGNVGFDFDSLFAEAAEAGEVEAEQVL
QIPDRPEWTKKDKLAFEREMLGLYVSDHPLRGLESALAKEASATIQQVTDPDASPGFDGE
IVTFAGLLTNVQHRTAKSGNLYGMVTIEDYTGEVQALFMGKSYQEFGQLLQPDSIVALRG
KMNSRDDGMTMHAYGVRPINAAVQDDATTLMLTLSDTRATEDLMEELKSMLGRHRGDSEV
RLNLLTNNVVRVFELKQQVRVTADLYGELKGLLGPRCLNSIEDAVT
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
gtggctgaaaacgatggatttgttcacctgcacgtgcacagcgagtactcgatgctcgat
ggtgcggcgcgagttaaaccgctgattcaggcggcggccgagcagaatatgccggcgatt
gcggtgacggaccacggcaacacctttggcgcttttgatttttggaagactgcaaacgac
gcgggtgtgaagcctattgtgggtatcgaagcgtacgtgaccccgggaactcatcgcagt
gaccgcacgcgcgtgcgctggggcgacggtgctggcgacgacgtgtcgggtgccggtgcg
tacacgcacatgacgttgctctcgcaaaacaccgagggcatgcacaatctcttccgcctc
tcaagcctcgcctcgatcgagggctactacttcaagccccgcatggaccgagagctgctg
cagaagtaccacaacggtctgatcgccaccacgggctgcccctccggagagatccagacg
cgtattcgcctgggtcagctgaaggaagcgcgtgaggctgcggcggagttccaggatctc
ttcggcaaggagaacttcttctgtgagctgatggatcacggcctcgacattgagcgccgg
gtaaaaaaagacctcatcgaaatcgcgcgcgacctgaagatcccgcttgtcgccacgaac
gacctgcactacgtgcacgagaccgacgccgaggcgcactccgcgctgctgtgtgtgcag
tcgggatcacgcatggacgatcccaaccgtttccagttcagcggcagcggctactacctg
aagtcggcggccgagatgcggcacgtcttccgtgagctgcccgaggcctgcgacaatacg
ctgctcattgctgagcggtgcggatccgagttcaacacgagcgcaaactatatgccgcgc
tacccggtgcccgatggggagaccgaggaaagctggtttattaaagaggtcgagcgtggc
ctgcactaccgctacccgggtgggatccccgacgccgtgcgcaagcaggccgagtacgag
accggcgttatcacccagatgggcttcccgggctacttcctcgtcgtcgccgacttcatc
aactggtcaaaggacaacgggatccgcgtgggtccgggtcgtggttccggtgcgggatcg
atggccgcatacgcgatgaggatcacggacctcgatccgctgcagcacgggctcatcttc
gagcgcttcctcaaccccgatcgtgtctccatgcccgacttcgacgtcgacttcgatgat
cgtcgccgtggcgaggtgatcaactacgtcaccgagaagtacggcgatgcgcgtgtggcg
cagattgtgacctacggcacgattaagtcgaagcaggcgctcaaggactcctcgcgtgtg
ctcggcttcccgtttggcatgggggagaagctcaccaaggccatgccacccgccgtgatg
gcgaaggacattccgctgtcgggcattaccgatcctgcccacccgcggtacaaggaagct
gcggagttccgaaccgtgctggccgaggacgccgaggcgaagtcggtctatgagaccgcg
ctcgggcttgagggactgaaacgccagtggggtgtgcacgcggccggtgtgatcatgtcg
agtgacccgctcatcgacatcatcccgatcatgaagcgtgagcaagacggccagatcgtc
acgcagttcgactacccgacctgtgagggcctcgggctcatcaagatggacttcctgggg
ttgcgtaacctcacgatcatctctgacgcgctcgagaacattcgcctgaaccgtggcgag
gtgctggatctcgaacgactcgagcttgacgacgctccctcgtatgagttgctcgcgcgc
ggcgatacgcttggggtgttccagcttgacggcggcccaatgcgtggcctgttgcggctc
atgaagcctgacaacttcgaagatatttcggccgtgctcgcgctgtaccgcccgggaccc
atgggcgccgactcgcacacgaactacgcgctgcgtaaaaacggcctgcagccgatcacc
ccgattcacccagaactcgaggaaccgctgcgcgagattctcgacacgacttacggcctg
attatctatcaggagcaggtgatgtcgattgcgcagaaggtcgccgggttctcgctcggc
caagcagacattctgcgacgcgcgatgggtaagaagaagaaggaagaactcgacaaacag
tacgagggcttctccggcggtatgaaggcaaacggcttcggcgaagctgcgatcaaggcg
ctgtgggacattctgctgcccttctccgactacgcgtttaacaaggctcactccgccgcg
tacggcgtgattagctactggaccgcgtacctgaaggagcactacccggccgagtacatg
gccgcgctgctcacaagcgtcggcgactccaaagacaaactcgcgatctatctcaacgag
tgccgccgtatgggtatcaaggtgttgccgccagcggtgaacgagtcgttcgccgacttc
gccgccgtcggtgacgacattcgctttggtctcggtgcgattcgtaacgtgggtgcgaat
gtggtcgagggcatccgaggcgcccgtgaggcgcagggcgcctttgagagtttccacgac
ttcttgaagaaggtgccgctcgttgcgctcaacaagcgcacggtcgagtcactggtgaag
gccggtgcctttgacggcctcggcggaaccaggcgcgcgctggttgagattcacgagccc
gcgatcgagagcgcggtgaaagacaaacgcgacgccgagaagggcaacgtcggcttcgac
ttcgacagcctgttcgcagaggcggccgaagccggcgaggtcgaagcggagcaggtgctg
cagattccggatcgccccgagtggaccaaaaaagacaagcttgcgttcgagcgcgagatg
ctcgggctgtacgtgtcggatcacccgctgcgtggcctcgagtcggcgcttgcgaaggag
gcatccgcgacgattcagcaggtgaccgaccccgacgcgagcccgggattcgacggcgag
attgtcaccttcgcggggctgctcacaaacgtgcagcaccgcacggcaaagtcgggcaac
ctctacggcatggtgaccatagaggactacaccggtgaggtgcaggcgctctttatgggc
aagtcataccaggagttcggtcagctgctgcagcccgactcgattgttgcgctacgcggc
aagatgaactctcgtgacgacggcatgaccatgcacgcctatggtgttcgcccaatcaac
gcggcggtgcaagacgacgcgacgacactgatgctcacgctctccgatacccgggcaacc
gaggatctgatggaagagctgaagtcaatgcttgggcgtcaccgcggtgacagcgaggtt
cgcctgaatctgctgaccaacaacgtcgtgcgagtgtttgagttgaagcagcaggtgcga
gtgaccgcagatctgtacggtgaactcaaggggctgcttgggccgcgctgcctgaactca
atcgaagacgccgtaacgtaa
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