Lacinutrix venerupis: BWR22_02245
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Entry
BWR22_02245 CDS
T04680
Name
(GenBank) ribonuclease E/G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
lvn
Lacinutrix venerupis
Brite
KEGG Orthology (KO) [BR:
lvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvn03019
]
BWR22_02245
03009 Ribosome biogenesis [BR:
lvn03009
]
BWR22_02245
Messenger RNA biogenesis [BR:
lvn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BWR22_02245
Ribosome biogenesis [BR:
lvn03009
]
Prokaryotic type
rRNA processing factors
BWR22_02245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
APX99176
UniProt:
A0AAC9LLX4
LinkDB
All DBs
Position
complement(509197..510741)
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AA seq
514 aa
AA seq
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MNKELIIRSNSDGVDFALLKDGKLIELHKEEDSNNFAVGDVFIAKIRKAVPGLNAAFVNV
GYEKDAFLHYHDLGPKISSLLKFTKRVSTGKLNDFSLKDFPFEKDIDKDGKINNVIKSNQ
SMLVQIVKEPISTKGPRISSELSIAGRYIVLVPFSDRISISQKIEDKAEKDRLKRLVKSI
TPKGFGVIVRTVAEGKKVAELDKDLQNLLGRWTAMCKKLHKANHPSKVHGELNKASSILR
DIFNDSFTGIQVDDEALYIQIKDYVQEIAPKKESIVKLHQSNIPIFEKFGVDRQIKTAFG
KTVSMAKGAYLVIEHTEALHVIDVNSGNRSNKANSQEETALEVNLISATEVARQLRLRDM
GGIIVVDFIDQNKAENRKKLYNHLRDEMKDDRAKHKILPPSKFGLIQITRQRVRPEMNIK
TREENPNGNNGEEVEAPIVLVQKISQDVERLFKKDYKKLTLNTHPFIAAFLTKGFPSIRS
KWFFEHKKWVKIQPRDAYTYLEYHFLDKNGKEIK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagaattgattatcagatctaattctgacggtgttgattttgccttattaaaa
gatggaaaacttattgaattacataaggaagaggatagtaacaactttgctgttggcgat
gtgtttatcgccaaaattcgcaaagctgttcctggactaaatgctgcatttgtaaatgta
ggttacgagaaagatgcttttttgcattatcacgatttaggcccaaaaatatcttctctc
ttaaaattcacaaaacgtgtaagcacaggtaaattaaatgacttttcattaaaagatttc
ccatttgaaaaagatattgacaaagacggcaaaataaacaatgtcatcaagtcaaatcaa
tcaatgttagtacaaatagtaaaagaacctatatctacaaaaggtccaagaataagctca
gagctttctattgccggtagatatattgttttagtaccttttagcgatcgtatttctatt
tctcaaaaaatagaagataaagcagaaaaggacagattaaaacgtttggtaaaaagtatt
acaccaaaaggttttggagttattgtacgaacagtagccgaaggcaaaaaagtagccgaa
ttagacaaagatttacaaaacttgttaggtcgttggaccgcaatgtgtaaaaagctacat
aaagcaaatcatccttctaaagtacatggtgagttaaataaagcctcttcaatattaaga
gatatttttaacgactcctttacaggtattcaagtagacgatgaagcgctttacattcaa
attaaagattatgtgcaagaaattgcaccaaaaaaagaatcaatagtcaagttacatcaa
tctaatattccaatttttgaaaaatttggagtagatagacaaataaaaaccgcatttgga
aaaacggtttctatggctaaaggtgcctatttagttatagagcatacagaagcattacat
gttattgatgtaaacagtggaaataggtctaacaaagccaattcccaagaggaaacagcc
ttagaggttaatttaatttctgccacagaagttgcaagacaacttcgccttcgagatatg
ggaggcataatagtagtagattttatagaccaaaacaaagctgaaaacagaaaaaaactc
tacaatcatcttcgtgatgaaatgaaagacgacagagccaaacacaaaatattacctcca
agtaagtttggtttgattcaaattacaagacaaagagttcgaccagaaatgaacattaaa
accagagaagaaaaccctaatggtaataatggtgaagaagttgaagcaccaatagtattg
gtacaaaaaatttctcaagatgtagaacgcttattcaaaaaagactataaaaagttaact
ttaaacacacatccttttatagcagcctttttaacaaaaggctttccatctattcgttca
aaatggttttttgaacacaaaaaatgggtaaaaatacaacctagagatgcttacacatat
ttagaatatcattttttagataaaaatggtaaagaaattaaataa
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