Lacinutrix venerupis: BWR22_03990
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Entry
BWR22_03990 CDS
T04680
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lvn
Lacinutrix venerupis
Pathway
lvn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lvn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BWR22_03990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lvn03021
]
BWR22_03990
03400 DNA repair and recombination proteins [BR:
lvn03400
]
BWR22_03990
Enzymes [BR:
lvn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BWR22_03990
Transcription machinery [BR:
lvn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BWR22_03990
DNA repair and recombination proteins [BR:
lvn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BWR22_03990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF4249
Motif
Other DBs
NCBI-ProteinID:
APX99508
UniProt:
A0AAC9LJG3
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All DBs
Position
878292..879284
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AA seq
330 aa
AA seq
DB search
MAVFNFQKPDKVIMIDSTDFEGKFEFRPLEPGYGLTVGNALRRVLLSSLEGFAITSVRIE
GVDHEFSAIAGVVEDVTEIILNLKQMRFKRQIEDVDNESVSISISGQDKITAGDFQKFIS
GFQVLNSDLVICNLDPKVSVSMEITIEKGRGYVPAEENKKASAPIGTIFTDSIYTPIKNV
KYSIENYRVEQKTDYEKLVFEIQSDGSITPQDALTEAAKTLIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSFNKNDLMKFRNFG
KKSLTELEELVNVKGLNFGMDLSKYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcagtatttaattttcaaaagcccgataaagtaatcatgattgattctactgatttc
gaaggtaaattcgaattcagaccactagaaccaggatatggattaacagtaggaaatgct
ttaagaagagttttattatcttccttagaaggatttgcaataacatcggtaagaatagaa
ggtgttgatcacgaattttctgcaatagcaggtgtcgtagaagacgtaacagaaattata
ttaaacttaaaacaaatgcgttttaagcgtcaaatagaagatgtagataacgagtctgtt
tctatctctatttctggtcaagataaaattacagcaggtgatttccaaaagtttatttca
ggtttccaagtattaaattcagatttagtaatctgtaacttagatcctaaagtgagtgtt
tctatggaaattactattgaaaaaggaagaggttatgttcctgcagaagaaaacaagaaa
gcttctgcaccaataggaacaatcttcacagattcaatttatacaccaataaagaatgtt
aagtatagcattgagaattaccgtgtagagcaaaagacagattacgaaaaattagttttc
gaaattcaatctgacggatcaataactcctcaagatgctttaacagaagctgcaaaaacg
ttaattcaccacttcatgttattctcagatgagcgtattacattagaagctgatgaaata
gcacaaaccgaaacttatgatgaagagtcacttcacatgagacagttgcttaaaactaaa
ttagtggatatggatttatctgtacgtgcacttaattgtttaaaagctgctgaagtagat
acattaggagacttagtatctttcaataaaaacgatttaatgaagttccgtaacttcggt
aagaaatctttaacagagcttgaagagcttgtaaatgtaaaaggtttaaatttcggaatg
gacttatcaaaatataagttagataaagactaa
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