Lacinutrix venerupis: BWR22_07150
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Entry
BWR22_07150 CDS
T04680
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
lvn
Lacinutrix venerupis
Pathway
lvn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BWR22_07150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvn03019
]
BWR22_07150
Messenger RNA biogenesis [BR:
lvn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BWR22_07150
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH-I_KHDC4-BBP
KH_KhpA-B
DUF2076
KH_2
NttC
DUF3169
Ribosomal_S18
Motif
Other DBs
NCBI-ProteinID:
APY01490
UniProt:
A0AAC9LPP0
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Position
1605158..1606732
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AA seq
524 aa
AA seq
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MDNTIIFSIAGVAIGAIIGFVIAKMMEKNNASKLIKNAKKAASNILRDAKSEGESIKKDK
LLQSKEKFLELKTEHEKVISSREKKMSDAEKRTRDKESQISSELAKNKKLNLELESKKKD
YNHRLDIIDKKQEEVDRLHRSQIEQLEVISSLSAEDAKAQLIESLKGEAKTEANAYIQGK
MEEAKLTAQQDAKKIIINTIQRIGTEEAVDNCVSVFNIENDDVKGRIIGREGRNIRAIEA
ATGVEIIVDDTPEAIILSCFDSVRREIARLSLHKLVTDGRIHPARIEEVVKKTQKQIEQE
IIEVGKRTVIDLGIHGLHPELIKMVGRMKYRSSYGQNLLQHSREVAKLCGVMAAELGLNP
KLAKRAGLLHDIGKVPDAEADMETPHAILGMQWAEKFGEKGEVCNAIGAHHDEIEMTSLL
SPIIQVCDAISGARPGARRQVLDSYIQRLKDLEEIAFGFQGVKKAYAIQAGRELRVIVES
EKVNDQNAADLSFSISQKIQTDMTYPGQVKVTVIRETRAVNIAK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggataatacaataatatttagtattgcaggtgtagctattggagcaattataggcttt
gttatagcaaaaatgatggagaaaaataatgcttcaaaacttataaaaaatgcaaaaaaa
gcagcatcaaatattttaagagatgctaaaagtgaaggagaaagcattaaaaaagataaa
ttattacagtctaaagaaaaatttttagaattaaaaacagagcacgagaaagtaatttct
agtcgcgaaaagaaaatgtctgatgctgaaaagcgcacgcgtgataaagaatctcaaatt
tctagcgaactagcaaaaaataaaaaattaaacttagaattagaatctaaaaagaaagat
tacaatcaccgcttagatattatcgataaaaaacaagaagaagtagatagacttcataga
agccaaatagagcaattagaagtaatatcaagcttatctgccgaagatgctaaagcacag
ttaatagagtcgcttaaaggtgaagcaaaaaccgaagctaatgcttacattcaaggtaaa
atggaagaggctaaattaactgcccaacaagatgccaagaaaataataataaatacgata
caacgtataggtacagaagaagctgtagataattgtgtgtctgtatttaacatagagaat
gacgatgttaaaggccgtataattggccgagaaggaagaaatattagagctattgaggca
gcaacaggagtagaaattattgtagatgatacaccagaagctataattttatcttgtttc
gattctgtaagacgtgaaattgcacgtttatctttacataaattagtaaccgatggaaga
atacatcctgcacgaattgaagaagtggttaagaaaacccaaaaacaaatagaacaagaa
attatagaagttggtaagcgtacggttatagatttaggtattcatggactacatccagaa
ttaataaaaatggttgggcgtatgaaataccgttcgtcttacggacaaaatttattacaa
cactcgcgtgaagttgcaaaactttgtggagttatggctgcagaattaggtttaaatcct
aaattagctaaacgtgcaggattattacacgatataggtaaagtgccagatgctgaagca
gatatggaaactcctcacgctattttaggtatgcaatgggctgaaaaatttggagaaaaa
ggagaggtttgcaatgctattggagctcaccacgatgaaatagaaatgacatcgctactg
tcgccaatcattcaagtttgcgatgcaatttctggagcaagaccaggtgctagacgtcaa
gttttagatagttatatacaacgtttaaaagatttagaagaaatagcctttggatttcaa
ggtgtaaagaaagcttacgctattcaagcaggtagagagttacgtgttattgtagaaagc
gaaaaggtaaacgatcaaaatgctgcagatttatcgtttagtatttctcaaaaaatacaa
acagatatgacgtatccaggacaagtaaaagttacagtaattagagaaactagagcagtt
aatattgctaaataa
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