Lacinutrix venerupis: BWR22_07575
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Entry
BWR22_07575 CDS
T04680
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lvn
Lacinutrix venerupis
Brite
KEGG Orthology (KO) [BR:
lvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lvn03009
]
BWR22_07575
Enzymes [BR:
lvn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
BWR22_07575
Ribosome biogenesis [BR:
lvn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BWR22_07575
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
Methyltransf_15
TRM5-TYW2_MTfase
Cons_hypoth95
PrmA
TRAM
Methyltransf_11
FtsJ
Methyltransf_12
PCMT
UPF0020
N6_N4_Mtase
Methyltrans_SAM
RrnaAD
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
APY00178
UniProt:
A0AAC9LNJ0
LinkDB
All DBs
Position
complement(1691453..1692865)
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AA seq
470 aa
AA seq
DB search
MGRSKNRKKVFTNVEVIDAAAKGKTVAKAPDGKVIFLPNAVPGDVVDVQTFKKRKAYYEG
KATVFHKLSEKRTKPECEHFGVCGGCKWQDMAYEHQLFYKQKEVTNNLTRIGHIELPEVT
PIKASAEQYFYRNKMEFSFSDSRWLTLEEIQSDKNLGDRNALGFHIPGMWDKILDLNKCH
LQADPSNDIRNSIKSFAIENDLEFFNTRNQTGLLRTLMIRTSSTGDIMVLIQFFKDDKQK
RELLLNFVAEKFPQITSLQYVINGKANDTIYDQEVICYKGEDHIFEEMEGLKFKINAKSF
YQTNSAQAFELYKLTREFAGLNGDELVYDLYTGTGTIAQFVAKQAKKVVGVEAVPDAITA
AKENAQFNGIKNVEFFVGDMKNVFNEQFIATHGQPDVIITDPPRDGMHKDVVKQILNIAP
SKVVYVSCNSATQARDLELMDAIYKVTKTQAVDMFPQTHHVENIVLLEKR
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaagtaaaaatagaaagaaagttttcacaaatgttgaagttatagatgctgca
gcaaaaggaaaaactgttgcaaaagcaccagacggaaaagtaatttttttacctaatgcg
gtgcctggagatgttgtagacgtgcaaacttttaaaaagcgtaaagcttattatgaaggg
aaagctaccgtttttcataaattaagcgaaaaaagaacaaaaccagaatgtgaacatttt
ggtgtttgtggtgggtgcaaatggcaagatatggcctatgagcatcaattgttttacaaa
caaaaagaagtaaccaataacttaactagaattggacatattgaattgccagaggttaca
cctataaaagcttcggcagagcaatatttttatagaaataaaatggagttttcttttagt
gatagcagatggttaactttagaagaaatacaaagtgataaaaatcttggagatagaaat
gctttaggttttcatattccaggaatgtgggataaaattttagaccttaataagtgtcac
ctacaagcagacccatctaatgacataagaaatagcattaaatcatttgctatagaaaat
gatttagagttttttaatacaagaaatcaaacgggattattaagaactttaatgattaga
acatcttctactggagatattatggttttaattcagttttttaaagacgataagcaaaaa
cgtgaattgttattaaattttgtagcagaaaaatttccgcaaataacctctttacagtat
gtaattaatggtaaagctaatgatacaatttacgatcaagaagttatttgctacaaaggt
gaagaccatatttttgaagaaatggaaggtttaaagtttaaaattaatgccaaatctttt
taccaaacaaattctgcccaagccttcgagttatacaaacttactcgtgaatttgcagga
ttaaatggagatgaattagtttacgatttatataccggaacaggaacaattgcacagttt
gttgcaaaacaagctaaaaaagttgttggtgtagaagctgtaccagatgctattactgct
gcaaaagaaaatgcacaatttaatggtattaaaaacgttgagttttttgtaggtgatatg
aaaaatgtatttaacgaacaatttatagctacacacggacaaccagatgttattattaca
gatcctccaagagatggtatgcataaagacgttgttaaacaaatattaaacattgcgcca
agcaaagtagtttatgtaagttgcaatagcgcaacacaagctagagatttagaactcatg
gatgccatatataaagttacaaaaacacaagctgtagatatgtttccgcaaacacaccat
gtagaaaatattgtacttttagagaaacgctaa
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