Lacinutrix venerupis: BWR22_12390
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Entry
BWR22_12390 CDS
T04680
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lvn
Lacinutrix venerupis
Brite
KEGG Orthology (KO) [BR:
lvn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lvn03032
]
BWR22_12390
03400 DNA repair and recombination proteins [BR:
lvn03400
]
BWR22_12390
Enzymes [BR:
lvn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BWR22_12390
DNA replication proteins [BR:
lvn03032
]
Prokaryotic type
DNA Topoisomerases
BWR22_12390
DNA repair and recombination proteins [BR:
lvn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BWR22_12390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Ntox17
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
APY01072
UniProt:
A0AAC9PWP6
LinkDB
All DBs
Position
complement(2743549..2746074)
Genome browser
AA seq
841 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGKDFKVESSYGHISDLPSKELGVDVEGDFDPKYQVSSDK
KAVVKKLKELANKAEMVWLASDEDREGEAIAWHLAESLNLDKKKTRRIVFHEITKSAIQK
AVENPRQIDYDLVDAQQARRVLDRIVGYELSPVLWRKVKGGLSAGRVQSVSVRLIVEREQ
EINEFKPEASYRIDAEFSNEEGQSFKAKLPKAIKTKKEALAFLEKNANTTFKVSDLEKKP
AKKSPSAPFTTSTLQQEASRKLYFSVSKTMTMAQRLYEAGLITYMRTDSVNLSDEAKKGA
AKEIIDAYGKEYAKERDYKGKSKNAQEAHEAIRPTNFAVHSAGLDYDQTRLYELIWKRSI
ASQMSEAKLERTNVKINAASHKQTFTANGEVITFDGFLKVYLEGTDDEDLEQQEGMLPAM
KVNEVLLNKNITATERYTRAPYRFTEASLVKKLEELGIGRPSTYAPTISTIQNRNYVEKG
TVEGVERNYTQLVLEEGKINDNLLTEKVGSDKGKLVPTDIGIIVTNFLVNHFESILDYSF
TANVENQFDDIAEGKADWKKVMKSFYKDFHPKVIDVQENAERESGERILGEDPKSGKRVS
VRLGKFGPMVQMGTVDDDEDPTYASLAPDQQLASITFEEAMDLFKLPKTLGTYKGESVEV
NNGRFGPYVKFGGAYVSLPKGSDPLEVELDQAIELIKEKEKADAPIYMYKDLPVQKGKGR
FGPFIKWNNMFINVNKKYDWDNLSDEDIVELIEAKIQKEIDKVIHNWEEEGIRVEKARWG
RFNIIQGKVKIELPKTTDAPALTLEEVKGIIEKNAPKKKVRKKPAAKKKTATKKKTTVKK
K
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaatttagtaatagttgagtcacctgcgaaagcaaaaacaatcgaaaaattt
cttggaaaggactttaaggtagaatcgagttatgggcatatttccgatttaccttccaaa
gaattaggagtagatgtagaaggtgattttgatccaaaataccaagtatcctcagacaaa
aaagcagttgtaaaaaaactaaaagaattagcaaataaagcagaaatggtttggttggct
agtgatgaggatcgagaaggagaagctattgcttggcatttagccgagtcattaaattta
gataagaaaaaaacaagacgtattgtttttcatgaaattacaaaatctgcaatccaaaaa
gcagttgagaacccaagacaaatagattacgatttagtagatgctcaacaagcgcgtcgt
gtattagatagaattgtaggttacgagctgtctccggtattgtggagaaaagtaaaagga
ggtttgtctgcaggtcgagtgcaatcggtttcagttagattaattgtagagcgcgaacaa
gaaattaatgaatttaaaccagaagcatcttatagaattgatgcagagttttctaatgaa
gaagggcagtcgtttaaagctaaattgccaaaagcaattaaaactaaaaaagaagcatta
gcctttttagaaaaaaatgcaaatacaacatttaaggtttcagatctagaaaaaaaacca
gcaaaaaaatcaccttcagcgccatttacaacatcaacattacagcaagaagcgtcacgt
aaattatatttttctgttagtaaaaccatgaccatggcacaacgtttatacgaagccggt
ttgattacttatatgagaacagatagtgtaaacctatctgatgaagcaaaaaaaggagca
gcaaaagagattattgatgcttacggaaaagaatatgcaaaagaacgtgattataaaggg
aaatctaaaaacgcacaagaagctcacgaagcgattaggcctacaaactttgcagtacac
tctgcaggtttagactatgatcaaacaagattatatgagttaatttggaaacgttctata
gcctcgcaaatgagcgaagcaaaattagagcgtaccaatgttaaaattaatgctgcatca
cataaacaaacatttactgcaaatggagaggtaattacttttgatggatttttaaaggtg
tatttagaaggtacagacgatgaagatttagaacaacaagaaggtatgttgccagcaatg
aaagtaaatgaggtgcttttaaataaaaatatcactgcaacagagcgttacacaagagca
ccatatagatttacagaggcatccttagttaaaaagttagaagaacttggtattggtcgt
ccatctacttatgcgccaacaatatctacaatacaaaatagaaactatgtagaaaaaggt
actgttgaaggtgtagagcgtaattatacgcaattagttcttgaggaaggtaaaataaat
gataatctactaacagaaaaagttgggtcagataaagggaaattagttccaacagatatt
ggtattattgtaacaaactttttggtcaatcatttcgaaagtattttagactatagcttt
acagcaaatgtagagaatcagtttgacgatattgcagaaggtaaagcagattggaaaaaa
gtaatgaaatctttttataaagattttcatccaaaagtaattgacgttcaagaaaatgca
gaaagagaatctggagaacgtattttaggagaagatcctaaatctggaaaacgagtaagt
gtacgtttaggtaaatttggtcctatggtacaaatgggaactgtagacgatgatgaagat
cctacttacgctagtttagctccagatcagcagttagcaagtattacctttgaagaggct
atggacttattcaaacttcctaaaactttgggaacatataaaggagagtctgtagaagta
aataatggtcgttttggaccatatgtaaagtttggtggagcatacgtgtcgttgccaaag
ggaagcgatcctttagaagttgaattagatcaagcaatagaactaattaaggaaaaagaa
aaagcagatgcacctatatatatgtataaggatttgcctgtgcaaaaaggaaaaggacgt
tttgggccatttataaaatggaacaatatgtttataaatgtcaataaaaaatacgattgg
gataacttatcagatgaagatattgtagagttaatagaagcaaagattcaaaaagaaatt
gataaagtaattcataattgggaagaagaaggtattcgtgtagaaaaggcacgttgggga
agatttaatataattcaaggaaaagtaaaaattgaattacctaaaacaactgatgctcca
gctctaaccttagaagaagttaaagggataatagagaaaaacgcacctaaaaaaaaggtt
agaaagaaaccagcagcaaaaaagaaaactgctacaaagaaaaaaaccactgtaaaaaag
aaataa
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