Lacinutrix venerupis: BWR22_12430
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Entry
BWR22_12430 CDS
T04680
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lvn
Lacinutrix venerupis
Pathway
lvn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BWR22_12430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvn03019
]
BWR22_12430
03110 Chaperones and folding catalysts [BR:
lvn03110
]
BWR22_12430
03029 Mitochondrial biogenesis [BR:
lvn03029
]
BWR22_12430
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lvn04147
]
BWR22_12430
Enzymes [BR:
lvn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
BWR22_12430
Messenger RNA biogenesis [BR:
lvn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
BWR22_12430
Chaperones and folding catalysts [BR:
lvn03110
]
Heat shock proteins
HSP60 / Chaperonin
BWR22_12430
Mitochondrial biogenesis [BR:
lvn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
BWR22_12430
Exosome [BR:
lvn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
BWR22_12430
Exosomal proteins of other body fluids (saliva and urine)
BWR22_12430
Exosomal proteins of breast cancer cells
BWR22_12430
Exosomal proteins of colorectal cancer cells
BWR22_12430
Exosomal proteins of bladder cancer cells
BWR22_12430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Pho88
Motif
Other DBs
NCBI-ProteinID:
APY01079
UniProt:
A0AAC9LMX6
LinkDB
All DBs
Position
2751991..2753628
Genome browser
AA seq
545 aa
AA seq
DB search
MAKDIKFDIEARDGLKRGVDALANAVKVTLGPKGRNVIISRSFGAPVVTKDGVSVAKEIE
LENPLENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVKEGLKNVAAGANPMDLKRGID
KAVTALVEDLGKQAKEVKNSSDKIKQVASISANNDELIGDLIASAFGKVGKEGVITVEEA
KGTDTYVDVVEGMQFDRGYLSPYFVTDSEKMIADLENPYVLLYDKKVSTMKDLLPILEPV
AQTGKPLLIIAEDVDGEALATLVVNKLRGSLKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGFTLENASIEMLGTAERITIDKDNTTVVNGSGDKDMIKNRVNQIKSQIESTTSDY
DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALV
RAKSVLEKITTENLDETTGIQIVARAIEAPLRTIVENAGGEGSVVVNKVMEGKKDFGYDA
KTETYVDMLKAGIIDPKKVTRIALENAASVAGMILTTECALIDIKEDAPAGGGMPPMGGG
MPGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagatataaaatttgatatagaagcacgcgacggactaaaacgtggtgtagat
gcattagcaaatgctgtaaaagtaactttaggaccaaaaggaagaaatgtaattattagc
cgttcttttggtgcgccagttgtaactaaagatggtgtaagtgttgctaaagaaattgag
ttagaaaacccattagaaaacatgggagctcaaatggtaaaagaagtagcttctaaaact
aacgatttagctggtgatggtactacaacggcaaccgttttagcgcaagctattgtaaaa
gaaggattaaaaaatgttgctgccggtgcaaatcctatggacttaaaacgtggtattgac
aaagccgtaacagctttagttgaagacttaggaaaacaagctaaagaagtaaaaaactct
tcagataaaataaagcaagttgcttcaatctctgcaaataacgatgagttaattggagat
ttaattgctagcgcatttggaaaagttggaaaagaaggtgtaattactgttgaagaagcg
aaaggaacagacacttatgtagatgttgtagaaggaatgcagtttgacagaggttaccta
tctccttactttgtaacagatagtgagaaaatgattgcagatttagaaaacccttacgta
ttactatacgataagaaagtatctacaatgaaggatttacttcctattcttgagccagtt
gcacaaacaggaaagcctttattaattatagctgaagatgttgatggtgaagcattagcg
actttagtagtaaataaattacgtggatctttaaaaattgctgctgtaaaagcaccaggt
tttggagacagacgtaaagcaatgttagaagatattgctattttaactggaggaactgta
atttctgaagaacgcggatttacacttgaaaatgcctctattgaaatgcttggtactgca
gagcgcataactatagataaggacaatacaactgtagtaaatggatctggagataaagac
atgattaaaaaccgtgttaaccaaattaaatctcaaatagaatctacaacaagcgattac
gataaagaaaaactacaagaacgtcttgctaaattagcaggtggtgttgctgtactttat
gttggtgctgcaagtgaagtagaaatgaaagagaaaaaagaccgtgttgatgatgcttta
catgctacaagagcagctgtagaagaaggtattgttgcaggtggtggtgttgctttagta
agagctaaatctgttttagaaaaaattactacagaaaacttagacgaaactacaggaata
caaattgttgcacgtgctattgaagcacctttaagaactattgtagaaaatgctggtgga
gaaggtagtgttgttgtaaacaaagtcatggaaggtaaaaaagactttggttacgatgct
aaaaccgaaacttatgtagatatgcttaaagctggtattatagatcctaaaaaagtaact
agaatcgcattagaaaatgctgcttctgttgctggaatgattttaactacagagtgtgca
ttaatcgatattaaagaagatgctcctgctggtggcggaatgcctccaatgggtggtgga
atgccaggcatgatgtaa
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