Lacinutrix venerupis: BWR22_13295
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Entry
BWR22_13295 CDS
T04680
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lvn
Lacinutrix venerupis
Pathway
lvn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lvn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BWR22_13295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lvn03019
]
BWR22_13295
03016 Transfer RNA biogenesis [BR:
lvn03016
]
BWR22_13295
Enzymes [BR:
lvn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BWR22_13295
Messenger RNA biogenesis [BR:
lvn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BWR22_13295
Transfer RNA biogenesis [BR:
lvn03016
]
Prokaryotic type
tRNA degradation factors
BWR22_13295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
KH-I_KHDC4-BBP
S1_2
Motif
Other DBs
NCBI-ProteinID:
APY01240
UniProt:
A0AAC9PXS1
LinkDB
All DBs
Position
2938480..2940720
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AA seq
746 aa
AA seq
DB search
MIPKVFREVIDLGDGREISIETGKLAKQAHGSVVVQSGKCMLLCTVVSNYKQSPVDFLPL
TVDYREKFAAAGRYPGGFFKREARPSDGEVLTMRLVDRVLRPLFPKDYHSETQIMIQLMS
HDDDVMPDAMAGLAASAAIQLSDFPFECPISEARVGRINGEFIINPTLAQLEESDIDMMI
GASADSVMMVEGEMDEISEEEMAEAIKFAHEAIKVQCAAQVRLAEAFGKKETREYEPERA
DEDLAKKIHDMAYDKVYAIAKAGSAKHERSNAFSEIKEEIIATFSEEEQEDFGDLISKYY
YKAEKAAIRDLTLNEGLRLDGRKTDEIRPIWCEVDYLPSTHGSSIFTRGETQALATVTLG
TSRDANQIDMPSQEGEERFYLHYNFPPFSTGEARPIRGTSRREVGHGNLAQRALKGMVPD
ECPYTVRVVSEVLESNGSSSMATVCAGTMALMDAGVQMKKPVSGIAMGLISDADSGKYAV
LSDILGDEDHLGDMDFKVTGTADGITACQMDIKVKGLSYEILVNALKQARAGRLHILEKL
TDTISNPNADVKDHAPNMVTRRVPNEFIGALIGPGGKVIQEMQKETETTIVINEDPVTEE
GIVEIMGVGKKGIDAVMAKIDAILFKPEVGKVYTVKVIKMLDFGAVVEYMDAPGNEVLLH
VSELAWERTENVSDVVNMGDVFDVKYFGIDSRTRKEKVSRKAILPKPEGYVARPPRDDKR
SGGRDNKGKDNRGRDNRKPREDKKEN
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgattccaaaagtttttagagaggtcatagacctaggtgatggaagagaaatttctatc
gaaaccggaaaattagcaaaacaagcgcatggtagcgttgttgtgcaatcaggaaaatgt
atgttattatgtacagttgtttccaattacaaacaaagtccagtggactttttaccactt
acagtagattacagagaaaagtttgctgcagcaggtcgttatcctggaggtttctttaaa
agagaagcaagaccaagtgatggcgaagtattaactatgcgtttagtagaccgtgtttta
cgtccgttattccctaaagattatcattctgaaactcagataatgattcaattaatgtct
cacgatgacgatgttatgccagatgctatggctggtttagctgcttctgctgctatacaa
ttatcagatttcccatttgaatgcccaatctctgaagctagagttggacgtattaatgga
gaatttataatcaatccaacattggcacaattagaagaatctgatatagatatgatgatt
ggtgcttctgccgactcagtaatgatggtagaaggtgaaatggatgaaatttctgaagaa
gaaatggctgaagcaattaagtttgctcatgaagccattaaagtacaatgtgctgcgcaa
gttagattggccgaagcttttggaaagaaagaaactcgtgaatacgagccagaaagagca
gacgaagatttagctaagaaaattcatgacatggcttatgataaagtttatgcaatagca
aaagctggatctgctaaacatgaaagaagtaatgctttctctgaaataaaagaagaaatt
attgctaccttttctgaagaagagcaagaagattttggagatttaatttcaaaatattac
tacaaagctgaaaaagctgcaattagagatttaacattaaacgaaggtttacgtttagat
ggtcgtaaaacagatgaaattagaccaatttggtgtgaagtagattacttaccatctaca
catggatcttcaatctttacacgtggagaaacacaagcattagccactgtaactttagga
acatctagagatgctaaccaaatagacatgccatctcaagaaggagaagagcgtttctat
ttacactataatttcccaccattttcaactggtgaagctagaccaatacgtggtacatct
cgtagagaggtaggacatggtaacttagcacaacgtgctttaaaaggtatggtaccagat
gaatgtccttatacagtacgtgtggtttcagaagtattagaatctaacggttcttcttct
atggctacagtttgtgctggaacaatggcacttatggatgctggtgtacaaatgaaaaaa
ccagtttctggtattgctatgggattaatatctgacgcagattctggaaaatacgctgtt
ttatctgatattttaggtgatgaagatcatttaggagatatggactttaaagtaactggt
actgcagatggtattactgcttgccaaatggatattaaagtaaaaggattatcatatgag
attttagtaaacgcactaaaacaagctcgtgctggacgtttacatatcttagaaaaatta
acagacactatttctaatccaaatgcagatgttaaagatcatgcaccaaatatggtaaca
agaagagttcctaacgaatttattggagctttaattggaccaggaggaaaagtgatacaa
gaaatgcaaaaggaaactgagactactattgttattaatgaagatccagtaaccgaagaa
ggtattgtagaaattatgggtgtaggtaaaaaaggtatcgatgctgttatggcaaaaata
gatgctattttatttaagcctgaagttggtaaagtgtacacagtaaaagttatcaaaatg
ttagattttggtgctgttgttgagtatatggatgcacctggaaacgaagtattattacac
gtaagtgaattagcatgggaacgcacagaaaatgtatctgatgttgtaaatatgggagac
gtttttgatgtaaaatattttggaatagattcaagaactcgtaaagaaaaagtatctaga
aaagccatcttaccaaaaccagaaggttatgttgcaagaccaccaagggacgataaacgt
tctggtggacgtgataacaaaggtaaagataatcgcggtcgtgataatagaaaacctaga
gaagacaagaaggaaaattaa
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