KEGG   Limimaricola variabilis: T8T21_00025
Entry
T8T21_00025       CDS       T09625                                 
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
lvr  Limimaricola variabilis
Pathway
lvr00260  Glycine, serine and threonine metabolism
lvr00460  Cyanoamino acid metabolism
lvr00630  Glyoxylate and dicarboxylate metabolism
lvr00670  One carbon pool by folate
lvr00680  Methane metabolism
lvr01100  Metabolic pathways
lvr01110  Biosynthesis of secondary metabolites
lvr01120  Microbial metabolism in diverse environments
lvr01200  Carbon metabolism
lvr01230  Biosynthesis of amino acids
lvr01240  Biosynthesis of cofactors
lvr04981  Folate transport and metabolism
Module
lvr_M00140  C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:lvr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    T8T21_00025 (glyA)
  09102 Energy metabolism
   00680 Methane metabolism
    T8T21_00025 (glyA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    T8T21_00025 (glyA)
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    T8T21_00025 (glyA)
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    T8T21_00025 (glyA)
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    T8T21_00025 (glyA)
Enzymes [BR:lvr01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     T8T21_00025 (glyA)
SSDB
Motif
Pfam: SHMT Aminotran_1_2 DegT_DnrJ_EryC1
Other DBs
NCBI-ProteinID: WPY94551
LinkDB
Position
complement(2457..3752)
AA seq 431 aa
MNASTRDDGFFTETLDSRDPEIAKAITDELGRQRHEIELIASENIVSAAVLEAQGSVLTN
KYAEGYPGRRYYGGCEFADVAENLAIDRAKQLFSCEFANVQPNSGSQANQGVFQALLQPG
DTILGMSLDAGGHLTHGAKPNQSGKWFNAVQYGVRQQDQQIDYDRIQELATEHQPKMIIA
GGSAIPRIIDFPRMREIADSVGAYLLVDMAHFAGLVAAGLYPSPFPHAHVATTTTHKTLR
GPRGGMILTNDEAIAKKINSAIFPGIQGGPLMHVIAGKAVAFGEALRPEFKTYQQQVVKN
AQALADQLMKGGLDIVTGGTDSHLMLVDLRPKGVKGNATEDALGRANITCNKNGIPFDPE
KPAVTSGIRLGSPAGTTRGFGEAEFRQIADWIVEVVDGLAANGAEGNAEVEEKVRGEVEE
LCKRFPLYPNL
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgaacgcatccacccgcgacgacggcttcttcaccgaaacgctcgacagccgcgacccc
gagatcgccaaggcgatcaccgacgaactcggccgccagcgccacgagatcgagctgatc
gccagcgagaacatcgtctcggccgccgtgctcgaggcccagggctcggtgctcaccaac
aaatatgccgagggctatccggggcggcgctactacggcggctgcgaattcgccgacgtg
gccgagaacctcgccatcgaccgcgccaagcagctgttctcctgcgaattcgccaacgtg
cagccgaactccggctcccaagcgaaccagggcgtgttccaggcgctgctgcagcccggc
gacaccatcctcgggatgagcctcgacgcgggcggtcacctgacccacggcgccaagccg
aaccaatcgggcaagtggttcaacgcggtccagtacggcgtgcgccagcaggaccagcag
atcgactacgaccggatccaggagctcgcgaccgagcaccagccgaagatgatcatcgcc
ggcggctcggccattccgcggatcatcgacttcccgcgcatgcgcgagatcgccgacagc
gtcggtgcgtatctgctcgtcgacatggcgcatttcgcgggcctcgtggcggcgggtctc
tacccctcccccttcccgcacgcgcatgtcgccaccaccaccacgcacaagacgctgcgc
ggcccgcgcggcggcatgatcctcaccaatgacgaggcgatcgccaagaagatcaactcg
gcgatcttcccgggcatccagggcggtccgctgatgcatgtcatcgccggcaaggccgtg
gccttcggcgaggcgctgcgccccgagttcaagacctaccagcagcaggtcgtgaagaac
gcccaggcgctcgccgaccagctgatgaagggcgggctcgacatcgtcaccggcggcacc
gacagccacctgatgctggtcgacctgcgccccaagggcgtgaagggcaacgcgaccgag
gacgcgctgggccgcgccaacatcacctgcaacaagaacggcatccccttcgacccggag
aagccggccgtgacctccggcatccgcctcggctcgcccgcgggcacgacgcgcggcttc
ggcgaagccgagttccggcagatcgccgactggatcgtcgaggtggtcgacgggctggcg
gcgaacggcgccgagggcaatgctgaggtcgaggagaaggtgcgcggcgaggtcgaggaa
ctctgcaagcgcttcccgctctaccccaacctctga

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