Limimaricola variabilis: T8T21_00265
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Entry
T8T21_00265 CDS
T09625
Name
(GenBank) TRAP transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
lvr
Limimaricola variabilis
Pathway
lvr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
T8T21_00265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lvr02000
]
T8T21_00265
Transporters [BR:
lvr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
T8T21_00265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
DUF5815
Motif
Other DBs
NCBI-ProteinID:
WPY94594
LinkDB
All DBs
Position
50446..51435
Genome browser
AA seq
329 aa
AA seq
DB search
MSYRTLTISLATAGALLGSAAAAAEFEFTFAHVLTEDTPNARAAVVFKEEVEKNSDGRIE
ISIRPAAQLGGDVEIIEQTQMGLVDIAIPPTGNLANFNEQMYLFDLPFLMEGNEAMKRVL
DGEVGTELLATLEANNLHGIAMWGAGFRNMTNNIRPIAGPEDLEGIKMRTLQAPTILSTY
RTYGANPTAMAYVEVYNGLQQGVVEGQENPLANIASMKFYEVQDYMTLTNHAYHTYAAVM
NLQAWNSLPDDLKTVVEEAMITGRDAAREFTVQDEARILEDIADEIAIIELSEEGRAAFI
EASQPIYEEFRPKISDALMDKALVAAKGE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcgcacccttaccatctcgctggccacggcgggcgccctgctgggctccgcg
gccgcggcggcggagttcgagttcaccttcgcccacgtgctgaccgaggacactcccaac
gcgcgcgccgcggtggtgttcaaggaagaggtcgagaagaactccgacggccggatcgag
atcagcatccgccccgccgcgcagctcggcggcgatgtcgagataatcgagcagacccag
atggggctggtcgatatcgcgatcccgccgaccggcaatctcgccaacttcaacgagcag
atgtacctgttcgacctgcccttcctaatggaaggcaacgaggcgatgaagcgcgttctc
gatggcgaggtcggcaccgagctgctcgccacgctggaggccaacaacctacacggcatt
gccatgtggggcgcgggcttccgcaacatgaccaacaacatccgcccgatcgccggcccc
gaggatctcgagggcattaagatgcgcacgctgcaggcgccgacgatcctctccacctac
cgcacctatggcgccaacccgactgcgatggcctacgtcgaggtctataacggcctccag
cagggtgttgtcgaggggcaggagaacccgctggccaacatcgcctcgatgaagttttac
gaggtgcaggactacatgacgctcaccaaccacgcctatcacacctatgcagcggtgatg
aacctgcaggcgtggaacagcctgcccgacgatcttaagacggtggtcgaggaggcgatg
attacgggccgcgacgcggcgcgcgaattcaccgttcaggacgaggcgcgcatcctcgag
gacatcgcggacgagatcgcgatcatcgagctgtccgaggagggccgcgccgcctttatc
gaggcctcgcagccgatctacgaggagttccgccccaagatttcggatgcgctgatggac
aaggcgctcgtggcggccaagggcgaatga
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