Limimaricola variabilis: T8T21_00275
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Entry
T8T21_00275 CDS
T09625
Name
(GenBank) TRAP transporter large permease
KO
K11690
TRAP-type transport system large permease protein
Organism
lvr
Limimaricola variabilis
Pathway
lvr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
T8T21_00275
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lvr02000
]
T8T21_00275
Transporters [BR:
lvr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
T8T21_00275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
DcuC
Na_H_antiporter
Tad
Motif
Other DBs
NCBI-ProteinID:
WPY94596
LinkDB
All DBs
Position
51975..53249
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AA seq
424 aa
AA seq
DB search
MVGALVPVFFGLLIFGLPIFAALALAVAAVFYFWGDMDPVLVPMRMFSGMNNFSLMSIPF
FILAAELMRIGGLSERLIGLARALIGWLPGGLAAAAVVACLMFGSISGSSPATVIAIGSI
LFPAMVEAGYDRRFSIGLIATAGTLGPIVPPSIALIIYGSVTGTSVGQLFAAGLLPALLI
GGLLVGFATWYSARKGYPRDAYPSVSSILAALRRAAWGLGLPVILLGGIYSGVFTPTESA
AAACLYGWFVGAVVYRSISLPETFKVLRSTGLISGPLLLITAGASAFSWLLASTGAPGDL
AAYVLSSTDNPFLVIALFNVILLLAGCFLDSASAIIILGPLMMPIAQQFGVDPIHFGVIM
LVNLSVGMLTPPVGLNLFVAMGVAKMSLGEVFRATLPTILLMLLALMLLSYIPAISMALP
SLLF
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggttggcgctctcgttcctgtcttcttcggcctgctgatcttcggcctgccgatcttc
gccgcgctggcgcttgccgtggcggccgtcttctacttctggggcgacatggatcccgtc
ctcgtaccgatgcgcatgttctcgggcatgaacaacttctcgctcatgtccattcccttc
ttcatcctcgccgccgagctgatgcggattggcggcctgtccgaacggctcatcggtctg
gcccgtgcgctgatcggctggctgcccggcgggctcgcggcagcggcagtagtggcatgc
ctaatgtttggttcgatctcgggctcgagcccggccacggtgatcgcgatcggctcgatc
ctgttccccgcgatggtcgaggcgggctacgaccggcgcttctccatcggcctgatcgcc
acggccggtacgcttggcccgatcgtgccaccctcgatcgcgctgatcatctacggctcg
gtcaccggcacctcggtaggccagctcttcgctgcgggcttgctgccggcgctgctgatt
ggcgggctgctggtcggcttcgcgacttggtactcggcgcgcaagggttacccgcgtgat
gcctacccctcggtgagcagcatccttgcggcgctgcgccgcgccgcctgggggctgggc
cttccggtgatcctcctgggcggcatctattcgggcgtgttcacccccaccgagagcgcc
gctgctgcctgtctctatggctggttcgtcggcgcagtggtctatcgcagcatctccctg
cccgagaccttcaaagtgctgcgcagcaccgggctgatctccggcccgctgctgctgatt
acggcgggcgcctcggccttctcgtggctgctggcctcgaccggcgcgcccggcgatctt
gcggcctatgtgctgtcgagcacagacaacccattccttgtgattgcgctgtttaacgtg
atcctgctgctggcaggctgctttctcgacagcgcctcagccatcatcatcctcggcccg
ctaatgatgccgatcgcccagcagttcggcgtggacccgatccattttggcgtgatcatg
ttggtgaacctctcggtcgggatgctgaccccgccagtggggctcaacctcttcgtcgcc
atgggagttgcgaagatgagcttaggcgaggtcttccgcgctaccttgccgacgatcttg
ttgatgctgttggcactgatgctgctgtcttacattcccgccatcagtatggctttgcca
agtctgctgttctag
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