KEGG   Limimaricola variabilis: T8T21_00605
Entry
T8T21_00605       CDS       T09625                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
lvr  Limimaricola variabilis
Pathway
lvr02020  Two-component system
Brite
KEGG Orthology (KO) [BR:lvr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    T8T21_00605
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:lvr02022]
    T8T21_00605
Two-component system [BR:lvr02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   T8T21_00605
SSDB
Motif
Pfam: Response_reg Sigma54_activ_2 Sigma54_activat HTH_8 AAA_16 FleQ HTH_30 HTH_50 AAA
Other DBs
NCBI-ProteinID: WPY94659
LinkDB
Position
124623..125870
AA seq 415 aa
MTNRVLLVDDDRAVREALGQTLELADLEPILAGSYIAAKDHIAPDFDGVIVTDIRMPGRD
GFHLLERAREVDPELPVILLTGEGDIPMAVRAMEQGAHAFLEKPCGPKEFVSTVRQALGL
RAEVLAARQARAAKFAGDAASRMLVGRSVQAEALRERVRAVARASAEALVCGPPGSGTSK
VAEVIHLLSASARAPFVKRAAAALDEAGLAAAFEEAGAGTLYLDEIAALPPGTQYALLDR
LESDAGTRPRVIGGTTRDPAAEADAGRLNPELFWRLDLMRVSIPPLRDRPDDIPVLFRHY
VAQACEQANLPMPEIGPDLVARLMAQDWPGNARALTSVAMRVAMGLDPGLGEAETGDELG
LAEQLARVERSLLIEALRRHEGHATRTAEALKLPRKTFYDKLARHGLKPEDYRHE
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgacgaacagggttctgttggtggacgacgatcgcgcggtgcgcgaggcgctgggacag
acgctggagctggcggatctcgagcccatcctcgcgggctcctatatcgcggccaaggac
cacatcgcccccgacttcgacggcgtcatagttaccgacatccgcatgccggggcgcgac
gggttccaccttctggagcgggcgcgggaggtcgatcccgaactgccggtaatcctgctg
accggcgagggcgacatcccgatggcggtccgggcgatggagcagggggcccatgccttc
ctcgaaaagccctgcgggccgaaggaattcgtgagcacggtgcggcaggcgctcggtctg
cgggcagaggtgctggccgcgcggcaggcgcgcgcggccaagtttgcgggcgatgcggcg
agccggatgctggtcggccgttcggtccaggccgaggcgttgcgcgagcgggttcgcgcg
gtggcgcgcgccagcgccgaagcgctggtctgcggccccccgggcagcggcacctcgaag
gtggccgaggtgatccacctgctttcggcctcggcccgtgcgccattcgtcaagcgcgcg
gcggcggccctcgacgaggctgggctcgctgcggcgttcgaggaagcgggcgctggcacg
ctctatctcgacgagatcgcggcactgcccccgggcacgcaatacgcgctgctcgaccgg
ctggagagcgacgcgggaacgcggccccgggtgatcggtggcaccacccgcgatccggct
gccgaggccgatgcaggccgtctcaatcccgagttgttctggcggctggacctgatgcgc
gtttccatcccgccgctgcgcgaccgacccgacgatatcccggtcctgtttcgccactac
gtcgcccaggcctgcgagcaggccaacctgccgatgccggaaatcggccctgacctggtg
gcgcggctgatggcgcaggactggccgggaaatgcccgcgcactgacctcggtggcgatg
cgggtggcgatggggctcgatccggggctgggcgaggcagagaccggggacgagctaggg
ctggccgagcagctggcccgcgtcgagcgctcgcttttgatcgaggcgctgcgccgtcat
gaagggcatgccacccgcactgccgaagcgctgaagctgccgcgcaagaccttctacgac
aagctggcgcggcacggcctcaagcccgaggactaccggcacgaatag

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