Limimaricola variabilis: T8T21_01015
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Entry
T8T21_01015 CDS
T09625
Name
(GenBank) PBP1A family penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
lvr
Limimaricola variabilis
Pathway
lvr00550
Peptidoglycan biosynthesis
lvr01100
Metabolic pathways
lvr01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
T8T21_01015
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
T8T21_01015
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lvr01003
]
T8T21_01015
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lvr01011
]
T8T21_01015
Enzymes [BR:
lvr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
T8T21_01015
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
T8T21_01015
Glycosyltransferases [BR:
lvr01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
T8T21_01015
Peptidoglycan biosynthesis and degradation proteins [BR:
lvr01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
T8T21_01015
BRITE hierarchy
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
WPY94735
LinkDB
All DBs
Position
192337..194859
Genome browser
AA seq
840 aa
AA seq
DB search
MLRFIMSFLGGIFSMLTLGLAMGALTLGAIFYVYGRDLPSYETLAQYTPPTISRVYDGEG
HILDEFATERRLFTPAEEIPDLVKHAFVSAEDQNFYVHSGFDVKGIVAAGVEAVRSRGED
IRGASTITQQVMKNFLLDGSRTLERKIKELILAVRIEGAMPKERILELYLNEIFLGQNSY
GVTAAAQTYFNKPLAQLEPGEAAYLAALAQRPGNLHPVRQYSDAVNRRNYVLRRMYEDGY
IDEAAYREGRGLPLNTVQSGDIESFRAALPPRDYFTDEVRRQLSAEFGEDEFFGGGLSIR
ATLDGELQIEAAHALQRALEQYDRGLGRWRGTGESIPVETLDDEIAWRTALSEVDVPRDV
TLESPWLPAVVMEVGESEMRLGIEGLADDGSEPHVVPRDDISWIKGSFADNFERGDVVLV
RRMVSDDDGSFIRWTLRQTPRVQGAFMAMDVNTGRVLAMQGGFSYQDSVFNRATQAMRQP
GSSFKPFVYAAALDSGYTPATIIVDAPIEINTPQGMWRPQNASNKFYGPTPLRTGIEQSR
NIMTIRLAQEVGMDTVADYGERFGVYDDLGPYLSNALGAQETTLFKMVAAYAMFANGGER
VEPTLVDRVQDRYGNTLYRHDQRNCVDCSLPELPAGAAPTIQSNRERIMNAVTAYQLTSM
MEGVVKRGTARGVNLPVPIAGKTGTTNDAKDVWFVGFSSNIVAGCYIGYDNPRSLGSGAS
GGGICGPVFESFMRSAIERFGGTEFPVPDECQFIKIDRFSGARLPDGAAGDNVISECFRM
GEEPLFGVAFDGGFEMSGDLPLYEEAGGNKPAKRVTTSTGNTATVGPKASFGTLSSGGLY
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcgcttcatcatgtcctttctcggcggcatcttctcgatgctgaccctcggcctc
gccatgggcgcgctgacgctcggcgcgatcttctacgtctacggacgcgacctgccgagc
tacgagacgctggcgcagtacacgccgccgacgatcagccgggtctatgacggcgagggg
cacatcctcgacgagttcgccaccgaacggcgtctcttcacccccgccgaggaaatcccg
gacctggtcaagcacgccttcgtctcggccgaggaccagaatttctacgtccactccgga
ttcgacgtgaagggcatcgtcgccgccggggtcgaggccgtgcgctcgcgcggcgaggac
atccgcggcgcctcgacgatcacccagcaggtgatgaagaacttcctgctcgacggctcg
cgcaccctcgagcgcaagatcaaggaactgatcctcgcggtccggatcgagggcgcgatg
cccaaggagcggattctcgaactctatctcaacgagatcttcctcggtcagaactcctat
ggcgtcaccgccgcggcgcagacctatttcaacaagccgctcgcgcagctcgagccgggc
gaggccgcctatctcgcggcgctggcgcagcggcccggcaacctgcacccggtgcggcag
tattcggacgcggtgaaccgccgcaactacgtgctccgccggatgtacgaagacggctat
atcgacgaggccgcctatcgcgagggccgtggcctgccgctcaacaccgtgcagtcgggc
gacatcgagagcttccgcgccgccctgccgccgcgcgactacttcaccgacgaggtgcgc
cgccagctttcggccgagttcggcgaggacgagtttttcggcggcggtctctcgatccgc
gccacgctggatggcgaactgcagatcgaggcggcgcatgcgctgcagcgcgcgctggag
cagtatgaccgcgggttgggccgctggcgcggcaccggcgagtcgatcccggtcgagacg
ttggatgacgagatcgcctggcgcaccgcgctgtcggaggtcgacgtgccccgcgacgtg
acgctcgagagcccctggctgccggccgtggtgatggaagtgggcgaaagcgagatgcgc
ctcggcatcgaggggctggccgatgacggctccgagccgcatgtcgtgccgcgcgacgac
atctcctggatcaagggcagcttcgccgacaatttcgagcgcggcgacgtggtacttgtg
cgccggatggtttccgacgacgacggcagcttcatccgctggacgctgcgccagacgccg
cgcgtgcagggcgccttcatggcgatggacgtcaacaccggccgggtgctggcgatgcag
ggcggcttctcctaccaggacagcgtgttcaaccgcgccacccaggcgatgcgccagccc
ggctcctccttcaagcccttcgtctacgcggccgcactcgacagcggctacaccccggcg
acgattatcgtcgacgccccgatcgagatcaacacgccgcagggcatgtggcggccgcag
aacgcctccaacaagttctacggcccgaccccgctccggaccggcatcgagcagtcgcgc
aacatcatgacgatcaggctcgcgcaggaggtcggcatggataccgtcgccgattacggc
gagcgcttcggcgtctacgacgatctcggcccctatctgtcgaacgcgctgggcgcgcag
gagacgacgctgttcaagatggtcgcggcctacgccatgttcgccaatggcggcgagcgg
gtggagccgacgctggtcgaccgggtgcaggaccgttacggcaacacgctgtatcgccat
gaccagcgcaactgcgtcgactgctcactgcccgagctgccggccggcgccgcgccgacc
atccagtcgaaccgcgagcggatcatgaacgccgtcaccgcctaccagctcacctcgatg
atggagggcgtggtcaagcgcggcacggcgcgcggcgtcaacctgccggtgccgatcgcc
ggcaagaccggcaccaccaacgacgccaaggacgtctggttcgtgggcttctcctcgaac
atcgtggcgggctgctacatcggctacgacaacccgcgctcgctgggctcgggggcttcc
ggtggcggtatctgcggcccggtcttcgaaagcttcatgcgcagcgccatcgagcgcttc
ggcggcaccgagttcccggttccggatgaatgccagttcatcaagatcgaccgcttctcg
ggcgcccggctgcccgacggcgccgcgggcgacaacgtgatctcggagtgcttccggatg
ggcgaggagccgctcttcggcgtggccttcgacggcggcttcgagatgtcgggcgacctg
ccgctctacgaggaggccggcggcaacaagccggccaagagggtcaccacctcgactggc
aacaccgccacggtgggccccaaggcaagcttcggcacgctgtcctcgggcggtctctac
tga
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