Limimaricola variabilis: T8T21_01065
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Entry
T8T21_01065 CDS
T09625
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
lvr
Limimaricola variabilis
Pathway
lvr00010
Glycolysis / Gluconeogenesis
lvr00020
Citrate cycle (TCA cycle)
lvr00260
Glycine, serine and threonine metabolism
lvr00280
Valine, leucine and isoleucine degradation
lvr00310
Lysine degradation
lvr00380
Tryptophan metabolism
lvr00620
Pyruvate metabolism
lvr00630
Glyoxylate and dicarboxylate metabolism
lvr00640
Propanoate metabolism
lvr00670
One carbon pool by folate
lvr00785
Lipoic acid metabolism
lvr01100
Metabolic pathways
lvr01110
Biosynthesis of secondary metabolites
lvr01120
Microbial metabolism in diverse environments
lvr01200
Carbon metabolism
lvr01210
2-Oxocarboxylic acid metabolism
lvr01240
Biosynthesis of cofactors
Module
lvr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lvr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lvr_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
lvr_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
T8T21_01065 (lpdA)
00020 Citrate cycle (TCA cycle)
T8T21_01065 (lpdA)
00620 Pyruvate metabolism
T8T21_01065 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
T8T21_01065 (lpdA)
00640 Propanoate metabolism
T8T21_01065 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
T8T21_01065 (lpdA)
00280 Valine, leucine and isoleucine degradation
T8T21_01065 (lpdA)
00310 Lysine degradation
T8T21_01065 (lpdA)
00380 Tryptophan metabolism
T8T21_01065 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
T8T21_01065 (lpdA)
00670 One carbon pool by folate
T8T21_01065 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lvr04147
]
T8T21_01065 (lpdA)
Enzymes [BR:
lvr01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
T8T21_01065 (lpdA)
Exosome [BR:
lvr04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
T8T21_01065 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
FAD_oxidored
HI0933_like
GIDA
NAD_binding_8
DAO
AlaDh_PNT_C
FAD_binding_3
Lys_Orn_oxgnase
Thi4
2-Hacid_dh_C
3HCDH_N
Trp_halogenase
DUF5760
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
WPY94745
LinkDB
All DBs
Position
206628..208022
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AA seq
464 aa
AA seq
DB search
MAAKNFDVIVIGAGPGGYVAAIRAAQLGKKVVIVERENLGGICLNWGCIPTKAMLRSSEV
FHLMHRAKEFGLKAESIGYDLDAVVKRSRGVAKQLSSGIGHLMKKNKIEVVMGEATIPAK
GKVTVKTEKGSEELTAKNIVLATGARARNLPGLEADGDLVWSYRHALVPPRMPKKLLVIG
SGAIGIEFASFYNTLGAETTVVEVMDRILPVEDAEISTFAKKQFVKQGMTIMEKATVKQL
DRGKGKVTAHIESKGKTETHEFDTVISAVGIVGNTEGLGLEELGVKIDRTHVVTDEYCRT
GVEGLYAIGDIAGAPWLAHKASHEGVMVAELIAGEHPHPVKPESIAGCTYCQPQVASVGY
TEAKAKELGYEVRVGRFPFIGNGKAIALGEAEGMVKTVFDAKTGELLGAHMVGAEVTELI
QGYIVGRTLETTEKELMETVFPHPTLSEMMHESVLDAYGRALHY
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaagaacttcgacgtgatcgtgatcggggctggccccggcggctatgtcgcc
gcgatccgcgccgcccagctgggcaagaaggtcgtgatcgtcgagcgcgagaacctgggc
ggcatctgcctcaactggggctgcatcccgaccaaggcgatgctgcgctcctccgaggtg
ttccaccttatgcaccgggccaaggagttcggtctcaaggcggagagcatcggctacgat
ctcgacgcggtggtcaagcgttcgcgcggggtggccaagcagctctcctccgggatcggc
cacctgatgaagaagaacaagatcgaggtggtgatgggcgaagccaccatccccgccaag
ggcaaggtcacggtcaagaccgagaagggcagcgaggagctgaccgccaagaacatcgtt
ctcgccaccggcgcccgcgcccgcaacctgccgggcctcgaagccgatggtgatctggtc
tggtcctaccgccacgcgctggtgccgccgcggatgcccaagaagctgctcgtcatcggc
tcgggcgcgatcggcatcgagttcgccagcttctacaacacgctaggcgccgagacgacg
gtggtcgaggtgatggaccggatcctgccggtcgaggatgccgagatctcgaccttcgcc
aagaagcagttcgtcaagcagggcatgacgatcatggagaaggccacggtcaagcagctc
gaccgcggcaagggcaaggtcaccgcccatatcgaatccaagggcaagaccgagacccac
gagttcgacacggtgatctcggccgtcggcatcgtcggcaacaccgaaggcctcggcctc
gaggagctgggcgtgaagatcgatcggacccatgtggtgacggacgagtactgccgcacc
ggtgtcgaggggctctatgccatcggcgacatcgctggcgcgccctggcttgcgcacaag
gcgagccatgagggcgtcatggtggccgagctgatcgccggcgagcatccgcatccggtc
aagcccgagagcatcgccggctgcacctattgccagccgcaggtcgccagcgtcggctac
accgaggccaaggccaaggaattgggctacgaggtccgggttggccgcttccccttcatc
ggcaacggcaaggcgatcgcgctgggcgaggccgagggcatggtcaagaccgtgttcgac
gccaagaccggcgagcttctgggcgcccacatggtcggggccgaggtgaccgagctgatc
cagggctacatcgtcggccgcacgctcgagaccaccgaaaaggagctgatggagacggtg
ttcccgcatccgacgctctccgagatgatgcatgaaagcgtactcgacgcctatggccgg
gcgctccactactga
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