Limimaricola variabilis: T8T21_01405
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Entry
T8T21_01405 CDS
T09625
Name
(GenBank) ABC transporter permease subunit
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
lvr
Limimaricola variabilis
Pathway
lvr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
T8T21_01405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lvr02000
]
T8T21_01405
Transporters [BR:
lvr02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
T8T21_01405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
WPY94811
LinkDB
All DBs
Position
275532..276389
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AA seq
285 aa
AA seq
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MAGSATSAIEVIGRGHPWLSLAPALCVIAVLFGGGLVLGLAGSFGMGRGGASVDAWIAVL
SEGRVWRSLGLSLWIAFASTALACLIGLGAALLLRRRFPGQGLARLLFQINLTIPHAVGA
LGILWLLSQSGFVSRLSAGAGLIDGPAGFPALTQDRFAIGIIAHYVWKEVPFIGLILLAN
MQSLGDDPESAARSLGASPFAAMRLVLLPLLMPALIRAGAIVFAFSFGAWEVPVLLGQSA
PVALPVLAWQRFTDPDLATRPEAMAIAMLIALVAALLIRVAMVRR
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggctggatccgcaacgtcggcaattgaggtgatcgggcgcgggcatccatggctgtcg
ctcgcgcccgcgctttgcgtgatcgcggtgctgttcggcggcggcctcgtgctggggctc
gcgggctccttcggcatggggcgcggcggcgccagcgtggacgcgtggatcgcggtgctt
tcggaggggcgggtctggcgttcgctcggcctgtcgctctggatcgccttcgcctcgacc
gcgcttgcctgccttatcggtctcggcgccgcgctgctgctgcgccgccggtttccgggg
caggggctggcgcggctgctgttccagatcaacctgactatcccgcacgccgtcggcgcg
ctgggcattctgtggctgttgtcgcaatcgggcttcgtctcgcggctgtcggcgggcgcc
gggctgatcgacggtccggcagggtttcccgccctgacgcaggatcgtttcgccatcggc
atcatcgcccattacgtctggaaggaagtgcccttcatcgggctgatcctgctggccaac
atgcagtcgctcggtgacgatcccgaaagcgcggcacggtcccttggcgcgtcgcccttc
gcggcgatgcggctggtgctgctgccgctgctgatgccggcgctgatccgtgcgggcgcc
atcgtcttcgcgttctccttcggggcgtgggaggtgccggtgctgttgggccagagcgcg
cccgtggcgttgccggtgctggcatggcagcgcttcaccgatcccgacctcgcgacacgg
cccgaggcgatggcgatcgcgatgctgatcgcgctggtggcggcgctgctcattcgtgtc
gcgatggtgcggcgatga
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