Limimaricola variabilis: T8T21_01660
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Entry
T8T21_01660 CDS
T09625
Symbol
xylF
Name
(GenBank) D-xylose ABC transporter substrate-binding protein
KO
K10543
D-xylose transport system substrate-binding protein
Organism
lvr
Limimaricola variabilis
Pathway
lvr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
T8T21_01660 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lvr02000
]
T8T21_01660 (xylF)
Transporters [BR:
lvr02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
T8T21_01660 (xylF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
DHQS
Motif
Other DBs
NCBI-ProteinID:
WPY94858
LinkDB
All DBs
Position
330372..331406
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AA seq
344 aa
AA seq
DB search
MRNAILAAVALTAGFSTTAIAEQHGMTVGVSWSNFQEERWKTDEAAIKAALEAAGAEYVS
ADAQSSSSKQLSDVESLIAQGVDALIILAQDTQAIGPAVEAAFNEGIPVIAYDRLIEDDR
AFYLTFDNVEVGRMQARAVLEAAPEGNYVMIKGSPTDPNADFLRGGQQEVLQEAIDSGAI
TIVGEAYTDGWLPANAQRNMEQILTAQDNQVDAVVASNDGTAGGAVAALTAQGMDGIPVS
GQDADHAALNRVAQGTQTVSVWKDSRELGREAGEIAVELASGTEMSAIEGAEEWTSPAGT
TLWAKFLDPVPVTRENLDVVVDAGWIDQETLCQGVTGDVPACAE
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacgcaattctggccgccgtcgccctgacggccggcttcagcacgaccgcgatc
gccgaacagcacggcatgaccgtgggcgtgagctggtccaacttccaggaagagcgctgg
aagaccgacgaggccgcgatcaaggccgcgctcgaggccgccggcgccgaatatgtctcg
gccgacgcgcagtcctcgtcctctaagcagctctccgacgtcgagagcctgattgcccag
ggtgtcgacgcgctgatcatcctcgcgcaggacacccaggcgatcggccccgccgtcgag
gcggccttcaacgaaggcatcccggtcatcgcctatgaccgcctgatcgaggacgaccgc
gccttctacctgaccttcgacaacgtcgaggtcggccggatgcaggcccgcgccgtgctc
gaggccgcgcccgagggcaactacgtgatgatcaagggctcgcccaccgatcccaacgcc
gacttcctgcgcggcggtcagcaggaagtgctgcaggaggcgatcgattccggcgcgatc
accatcgtcggcgaggcctataccgatggctggctgcccgccaacgcccagcgcaacatg
gagcagatcctgaccgcgcaggacaaccaggtcgacgcagtcgtggcctcgaatgacggc
accgccggcggcgccgtggccgcgctcaccgcgcagggcatggacggcatcccggtctcg
ggccaggacgccgatcacgccgcgctcaaccgcgtcgcgcagggcacgcagaccgtctcg
gtctggaaggacagccgcgagctgggccgcgaagccggcgagatcgccgtcgagctggct
tcgggcaccgagatgagcgccatcgagggtgccgaagagtggacctcccccgccggcacc
acgctgtgggccaagttcctcgatccggtcccggtgacccgcgagaacctcgacgtcgtg
gtcgatgccggttggatcgaccaggagacgctgtgccagggcgtcaccggtgacgtcccc
gcctgcgccgaatga
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integrated database retrieval system
