Limimaricola variabilis: T8T21_02050
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Entry
T8T21_02050 CDS
T09625
Name
(GenBank) branched-chain amino acid ABC transporter permease
KO
K01998
branched-chain amino acid transport system permease protein
Organism
lvr
Limimaricola variabilis
Pathway
lvr02010
ABC transporters
lvr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
T8T21_02050
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
T8T21_02050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lvr02000
]
T8T21_02050
Transporters [BR:
lvr02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
T8T21_02050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
WPY96013
LinkDB
All DBs
Position
complement(403511..404434)
Genome browser
AA seq
307 aa
AA seq
DB search
MSKLHMAIFAVLFIVLAVLPMLVYPVFAMKVMCFALFAAAFNLLLGFGGLLSFGHAAYFG
GASYVAAHASKVWGWTPEASILVGTAAAALLGLAIGALAIRRQGIYFAMVTLAFAQMVYF
FALQAEFTGGEDGIQSVPRGELFGLFPVNSNEALYYLVLAVTFGGILFLYRIVHSPFGQV
LKAIRENEPRAISLGYRVNRYKLLVFVLSAGFAGLAGATKSQVFQLASLTDVHWSMSGEV
VLMTLLGGVGTIFGPLMGATIVVTMQNYLASMGAWVTVIQGVIFVLGVLLFREGVVGVIS
RWIKRPL
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaactgcacatggcgatcttcgcggtgctgttcatcgtgctcgccgtgctgccg
atgctggtctacccggtcttcgcgatgaaggtgatgtgcttcgccctcttcgcggcggcc
ttcaacctgctcctcggtttcggcgggctgctgtccttcggccacgccgcctatttcggc
ggcgcgagctacgtggcggcccatgcctccaaggtctggggctggacgcccgaggcctcg
atccttgtgggcacggcggccgccgcgctgctcggccttgcgatcggtgcgctggcgatc
cggcggcagggcatctatttcgccatggtgacgctggccttcgcgcagatggtctatttc
ttcgcgctgcaagccgagttcaccggtggcgaggacggcatccagtcggtgccgcgtggc
gagctgttcggcctgttcccggtcaacagcaacgaggcgctctactacctcgtgttggcc
gtgaccttcggcggcatcctgttcctctaccggatcgtgcattcgcccttcgggcaggtg
ctcaaggcgatccgcgagaacgagccgcgcgcgatctcgctgggctaccgggtcaaccgc
tacaagcttctggttttcgtactctccgccggtttcgccgggctcgctggcgcaaccaag
agccaggtgttccagctcgcctcgctgaccgacgtccactggtcgatgtcgggcgaggtg
gtgctgatgacgctcctgggcggcgtcggcacgatcttcggcccgctgatgggggcgacc
atcgtggttacgatgcagaactacctcgcctcgatgggggcttgggtcacggtgatccag
ggcgtgatcttcgtgctcggggtgttgctgttccgcgaaggcgtggtcggcgtgatctcg
cgctggatcaagcggccgctctga
DBGET
integrated database retrieval system
