Limimaricola variabilis: T8T21_02060
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Entry
T8T21_02060 CDS
T09625
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
lvr
Limimaricola variabilis
Pathway
lvr02010
ABC transporters
lvr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
T8T21_02060
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
T8T21_02060
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lvr02000
]
T8T21_02060
Transporters [BR:
lvr02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
T8T21_02060
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
WPY94935
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All DBs
Position
complement(405451..406653)
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AA seq
400 aa
AA seq
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MKKTVLGALTVASFGLPAMAQDNIEVTLGVLNDRSGVYADLSGEGSVVAARMAVEDFDAA
SKGLDVEVISADHQNKPDIASNIARQWYDQDGVDAILDVPTSSTALAVADITAQANKILI
DSGAGSTALTGEQCQPTTIHWTYDTAALAKGTGGAVTERGDTKWFFLTADYAFGHSLEEE
TMKIVEESGGEVVGSVRHPFPATDFSSFLLQAQGSGADVIGLANAGGDTVNAIKQASEFG
ITQAGQSLAALLMFITDVHALGAETAQGLVLTEAFYWDHDDDTREWSARFEEKFGSKPTM
VHAGVYSGTMHYLRAVEATGSTDGDVVAEWMKANSFDDPLFGEGYVRKDGRVIHDMHLYE
VKTPDESTGEWDLYKHVSTIPGEEAFLPMEGSGCAFANES
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaacggtactcggggcgctgaccgtcgcctccttcggcctgcccgccatggcc
caggacaacatcgaggtcacgctcggtgtcctcaacgaccgctcgggcgtctatgccgac
ctctcgggcgaaggctcggtggtggccgcgcgcatggcggtcgaggatttcgacgccgcc
tccaaaggcctcgacgtcgaggtgatctcggccgaccaccagaacaagcccgacatcgcc
tcgaacatcgcccgccagtggtacgatcaggacggcgtcgacgcgatcctcgacgtgccg
acctcctcgaccgcgctcgccgtggccgacatcaccgcgcaggccaacaagatcctgatc
gacagcggcgccggctccaccgcgctcaccggcgagcagtgccagccgaccaccatccac
tggacctatgacaccgcagcgctcgccaagggcaccggcggcgccgtgaccgagcgcggc
gacaccaagtggttcttcctcaccgccgactacgccttcggccattcgctcgaggaagag
acgatgaagatcgtcgaggaatccggcggcgaagtcgtcggttcggtgcgccaccccttc
ccggccaccgacttctcctccttcctgctgcaggcgcagggctcgggcgccgacgtgatc
ggtcttgcgaacgctggcggcgacacggtcaacgcgatcaagcaagcctcggagttcggc
atcacccaggccggccagtcgctcgccgcgctgctgatgttcatcaccgacgttcacgcg
ctgggcgccgagacggcccaggggctggtgctgaccgaggcgttctactgggatcacgac
gacgacacccgcgagtggtccgcccgcttcgaggagaagttcggctccaagccgaccatg
gttcatgccggcgtctactcgggtacgatgcattacctgcgcgccgtcgaggccaccggc
tcgaccgatggcgacgtcgtggcggaatggatgaaggccaactccttcgacgatccgctg
ttcggcgaaggctatgtccgcaaggacggccgggtgatccacgacatgcacctctacgag
gtgaagacgccggacgagtcgaccggcgagtgggatctctacaagcacgtctcgaccatc
cccggcgaggaagccttcctgccgatggaaggctcgggctgcgccttcgccaacgaaagc
tga
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