Limimaricola variabilis: T8T21_02100
Help
Entry
T8T21_02100 CDS
T09625
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
lvr
Limimaricola variabilis
Pathway
lvr00730
Thiamine metabolism
lvr01100
Metabolic pathways
lvr01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
T8T21_02100 (thiC)
Enzymes [BR:
lvr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
T8T21_02100 (thiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
WPY94942
LinkDB
All DBs
Position
complement(418135..419946)
Genome browser
AA seq
603 aa
AA seq
DB search
MTINTTPPELPKVTTGPLPASTKIHVPGRLFAQIRVPMREIALHPSAGEPDVRVYDSSGP
YTDPETAIDTSAGLARNRESWIDARGDTERYEGRTTRPEDNGRAAASDRLRPFPTRHLPR
RATGDRAVTQLAYARAGIVTAEMEYAAIRENMGRDAALARARDGESFGAAIPDQVTPEFV
RDEIARGRAIIPSNINHPELEPMVIGRNFLVKINANIGNSAVTSSMEEEVEKMVWAIRWG
ADTVMDLSTGRDIHDIRDWIIRNSPVPIGTVPLYQALEKVGGIAEDLTWEVFRDTLIEQA
EQGVDYFTIHAGLRLHHVPLTVGRTTGIVSRGGSIMAKWCLHHHKESFLYEHFEEICEIC
RRYDVSFSLGDGLRPGSIADANDAAQFAELETLGELTQIAWKHDCQVMIEGPGHVAMHKI
KENMDKQLACCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLG
LPDRDDVKTGVITYKIAAHAADLAKGHPGAQIRDDALSRARFEFRWEDQFNLALDPDTAR
SMHDETLPAAAHKTAHFCSMCGPKFCSMRISHDIRAEAQKEGMEKMAAKFREGGELYLPE
AES
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcaacaccaccccgcccgaattgcccaaggtcaccacgggcccgctgcccgcc
tccaccaagatccatgtcccgggccgcctgtttgcccagatccgggtgccgatgcgcgag
attgccctgcacccgagcgccggcgagccggatgtccgggtctatgacagctcgggcccc
tataccgaccccgagaccgcaatcgacacctcggcgggcctcgcgcggaaccgcgaaagc
tggatcgatgcgcgcggcgatacagagcgctacgaaggccgcaccacgcgccccgaggat
aacggccgcgccgccgcctcggaccggctgcgccccttcccgacccgccacttgccgcgc
cgtgccaccggcgaccgcgccgtcacgcagctcgcctatgcgcgcgcgggcatcgtcacg
gcggagatggaatacgcggcaatccgcgagaacatgggccgcgacgccgcgctggcgcgg
gcgcgcgacggcgaaagcttcggtgccgcgattcccgaccaggtcacgcccgaattcgtg
cgcgacgagatcgcccggggccgcgccatcatcccgtcgaacatcaaccatcccgagctc
gagccgatggtgatcggccgcaacttcctcgtgaagatcaacgccaatatcggcaactcg
gcggtcacctcctcgatggaggaggaggtcgagaagatggtctgggcgatccgctggggc
gccgacacggtgatggacctctccacggggcgcgacatccacgacatccgcgactggatc
atccgcaactctccggtaccgatcggcacggtgccgctctaccaggcgctggagaaggtt
ggcggcatcgccgaggacctcacctgggaggtgttccgcgacacgctgatcgagcaggcc
gagcagggcgtcgactacttcaccatccatgcgggtctgcgcctgcaccacgtgccgctc
accgtggggcgcaccaccggcatcgtcagccgcggcggctcgatcatggcgaagtggtgc
ctgcaccatcacaaggaaagcttcctctacgagcatttcgaggagatctgcgagatctgc
cgccgctacgacgtgtcgttctccctgggcgacgggctgcgtcccggctcgatcgccgac
gccaacgacgccgcgcagttcgctgagctggagacgctgggcgaactcacccagatcgcc
tggaagcatgactgccaggtgatgatcgagggccccggccacgtcgccatgcacaagatc
aaggagaacatggacaagcagctggcctgctgcgacgaggcgcccttctacacgctcgga
cccctcaccaccgacatcgcgccgggctacgaccacatcacctccggcatcggcgcggcg
atgatcggttggttcggctgcgcgatgctgtgctacgtcacgcccaaggagcatctcggc
ctgcccgaccgcgacgacgtcaagaccggcgtcatcacctacaagatcgcggcccatgcc
gccgatctcgccaaggggcatccgggcgcgcagatccgcgacgacgcgctgagccgggcg
cggttcgagttccgctgggaagaccagttcaacctcgcgctcgatcccgacacggcccgc
tcgatgcatgacgagacgctgcccgcggcggcgcacaagacggcgcatttctgctccatg
tgcgggcccaagttctgctcgatgcggatcagccacgacatccgcgccgaggcgcagaag
gagggcatggagaagatggcggcgaagttccgggagggaggcgagctctacctgcccgaa
gccgaaagctga
DBGET
integrated database retrieval system
