Limimaricola variabilis: T8T21_03340
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Entry
T8T21_03340 CDS
T09625
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
lvr
Limimaricola variabilis
Pathway
lvr00020
Citrate cycle (TCA cycle)
lvr00480
Glutathione metabolism
lvr00720
Other carbon fixation pathways
lvr01100
Metabolic pathways
lvr01110
Biosynthesis of secondary metabolites
lvr01120
Microbial metabolism in diverse environments
lvr01200
Carbon metabolism
lvr01210
2-Oxocarboxylic acid metabolism
lvr01230
Biosynthesis of amino acids
lvr04146
Peroxisome
Module
lvr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lvr_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
T8T21_03340
09102 Energy metabolism
00720 Other carbon fixation pathways
T8T21_03340
09106 Metabolism of other amino acids
00480 Glutathione metabolism
T8T21_03340
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
T8T21_03340
Enzymes [BR:
lvr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
T8T21_03340
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Ortholog
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GFIT
Motif
Pfam:
Iso_dh
Motif
Other DBs
NCBI-ProteinID:
WPY95174
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All DBs
Position
complement(679609..680820)
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AA seq
403 aa
AA seq
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MTKIKVENPVVELDGDEMTRIIWDFIKQKLILPYLDIDLKYYDLGIEARDETDDQITVDA
AEAIKKYGVGVKCATITPDEARVEEFGLKRMYRSPNGTIRNILGGVIFREPIICRNVPRL
VPGWTQPIVVGRHAFGDQYRATDFRFPGKGKLTIKFVGEDGETIEHEVFQAPGAGVTMAM
YNLDDSIRDFARASMNYGLARGWPVYLSTKNTILKAYDGRFKDLFQEVFDNEFAEEFKKK
GITYEHRLIDDMVAAAMKWSGGYVWACKNYDGDVQSDTVAQGFGSLGLMTSQLMTPDGKI
VEAEAAHGTVTRHFRQHQRGEQTSTNSIASIYAWTGGLKHRAKLDGNDQLLNFAETLEKV
TVQAVEDGHMTKDLALLVGPDQKWLTTMGFLEKIDEYLNKSLA
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaagatcaaagtcgaaaatccggtcgtcgagctcgacggcgacgagatgacccgg
atcatctgggacttcatcaagcagaagctgatcctgccctatctcgacatcgacctgaaa
tactacgacctcggcatcgaggcgcgcgacgagaccgacgaccagatcacggtcgacgcg
gccgaggcgatcaagaaatacggcgtcggcgtcaaatgcgcgacgatcacccccgacgag
gcccgcgtcgaggagttcggcctgaagcggatgtaccgttcgcccaacggcacgatccgc
aacatcctcggcggcgtgatcttccgcgagccgatcatctgccgcaacgtgccgcgtctg
gtgccgggctggacccagccgatcgtcgtcggccgtcacgccttcggtgaccagtaccgc
gccacagacttccgcttccccggcaagggcaagctgacgatcaagttcgtcggcgaggat
ggcgagaccatcgagcacgaggtgttccaggcccccggtgccggcgtcaccatggcgatg
tacaacctcgacgattcgatccgcgatttcgctcgcgcctcgatgaactacggcctcgcc
cgcggctggccggtctacctgtcgaccaagaacacgatcctcaaggcctatgacggccgc
ttcaaggacctgttccaggaagtcttcgacaacgagttcgccgaggagttcaagaagaag
ggcatcacctacgagcaccgcctgatcgacgacatggtcgccgcggcgatgaagtggtcg
ggcggttatgtctgggcctgcaagaactacgatggcgacgtgcagtccgacactgtggcg
cagggcttcggctcgcttggcctgatgacctcgcagctgatgaccccggacggaaagatc
gtcgaggccgaggccgcgcacggcaccgtgacgcgtcacttccgccagcaccagcgtggc
gagcagacctcgaccaactcgatcgcgtcgatctacgcctggaccggcggcctcaagcac
cgcgccaagctcgacggtaacgaccagctgctgaacttcgccgagacgctggagaaggtc
accgtgcaggcggtcgaggacggtcacatgaccaaggacctcgcgctgctcgtcggcccc
gatcagaagtggctcaccaccatgggcttcctcgagaagatcgacgagtacctcaacaag
tcgctcgcctga
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