Limimaricola variabilis: T8T21_03805
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Entry
T8T21_03805 CDS
T09625
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
lvr
Limimaricola variabilis
Brite
KEGG Orthology (KO) [BR:
lvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lvr03400
]
T8T21_03805
DNA repair and recombination proteins [BR:
lvr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
T8T21_03805
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
WPY95260
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Position
complement(771477..771944)
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AA seq
155 aa
AA seq
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MADVVDAATRSRMMAGIRGKDTRPEMILRRGLHARGFRYRLHDRRLPGSPDLVFPGRRAV
IFIHGCFWHGHGCHLFRLPTTRREFWEAKIEGNRARDRAAEAALLANGWRVLTIWECALK
GRERVPVDKVLDRAADWLANGPIEETIAGGANGSF
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
ttggctgacgtggtggacgccgcgacccgctcccggatgatggcgggaatccggggaaag
gacacgcggcccgaaatgatcctgcggcgggggctccatgcccggggcttccgctacagg
cttcacgatcgccggttacccggctcgcccgatctcgtgtttcccgggcgtcgcgcggtg
atcttcattcacggctgcttctggcacggtcacggctgccacctgttccggctgcccacc
acgcggcgcgagttctgggaggcgaagatagagggcaaccgcgcccgggatcgggccgcc
gaggccgcccttctagccaatggatggcgggttctgacgatctgggaatgtgctctcaag
gggcgggagcgggtgcctgtggacaaggtacttgaccgagcagcggattggctggccaat
ggcccgatagaagaaacgattgcgggcggggcaaatggcagtttctga
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